Regulator ID	target symbol	target name	hgnc_id	ensembl_gene_id	uniprot ID	Entrez_id	type	type_class	cell_line	cell_id	species	cell_disease	ICD_disease	method	PMID	GSE	log2FoldChange	perturbation	direction	pvalue
REG00001	SNHG3	Small nucleolar RNA host gene 3	HGNC:10118	ENSG00000242125	.	8420	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103494	-1.366392552	knock down	down-regulator	0.000597156
REG00001	BCYRN1	Brain cytoplasmic RNA 1	HGNC:1022	ENSG00000236824	.	618	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103494	-0.709646047	knock down	down-regulator	0.02837925
REG00001	SLC22A18AS	SLC22A18 antisense RNA	HGNC:10965	ENSG00000254827	BWR1B_HUMAN	5003	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-0.688441281	knock down	down-regulator	0.000114302
REG00001	TSIX	TSIX transcript, XIST antisense RNA	HGNC:12377	ENSG00000270641	.	9383	Long non-coding RNA	Long non-coding	HEK293	CVCL_0045	Homo sapiens	Normal	.	CLIP-seq	28977517	GSE79577	.	.	.	.
REG00001	TSIX	TSIX transcript, XIST antisense RNA	HGNC:12377	ENSG00000270641	.	9383	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-2.99193452	knock out	down-regulator	9.26E-07
REG00001	MIR99AHG	Mir-99a-let-7c cluster host gene	HGNC:1274	ENSG00000215386	.	388815	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	0.955608261	knock out	up-regulate	0.027346228
REG00001	LINC01549	Long intergenic non-protein coding RNA 1549	HGNC:1277	ENSG00000232560	CU037_HUMAN	100505929	Long non-coding RNA	Long non-coding	HEK293	CVCL_0045	Homo sapiens	Normal	.	CLIP-seq	28977517	GSE79577	.	.	.	.
REG00001	XIST	X inactive specific transcript	HGNC:12810	ENSG00000229807	.	7503	Long non-coding RNA	Long non-coding	HEK293	CVCL_0045	Homo sapiens	Normal	.	CLIP-seq	28977517	GSE79577	.	.	.	.
REG00001	LINC00158	Long intergenic non-protein coding RNA 158	HGNC:1283	ENSG00000185433	CU042_HUMAN	54072	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-0.925776145	knock out	down-regulator	0.048201115
REG00001	IGF2-AS	IGF2 antisense RNA	HGNC:14062	ENSG00000099869	IG2AS_HUMAN	51214	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	0.919664991	knock down	up-regulate	0.043946097
REG00001	CFLAR-AS1	CFLAR antisense RNA 1	HGNC:14437	ENSG00000226312	.	65072	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103494	-0.758703198	knock down	down-regulator	0.031512154
REG00001	ST7-AS1	ST7 antisense RNA 1	HGNC:16000	ENSG00000227199	.	93653	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-0.699175312	knock out	down-regulator	0.038356946
REG00001	MACROD2-IT1	MACROD2 intronic transcript 1	HGNC:16201	ENSG00000227927	.	140848	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-0.936684935	knock out	down-regulator	0.002723329
REG00001	FAM182A	Family with sequence similarity 182 member A	HGNC:16222	ENSG00000125804	F182A_HUMAN	284800	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	0.76108263	knock out	up-regulate	0.030720223
REG00001	GAS5	Growth arrest specific 5	HGNC:16355	ENSG00000234741	.	60674	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103494	-1.615298637	knock down	down-regulator	2.56E-10
REG00001	GAS5	Growth arrest specific 5	HGNC:16355	ENSG00000234741	.	60674	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	1.198074777	knock down	up-regulate	2.53E-12
REG00001	GAS5	Growth arrest specific 5	HGNC:16355	ENSG00000234741	.	60674	Long non-coding RNA	Long non-coding	HEK293T	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28002401	GSE78040	0.586599439	knock down	up-regulate	4.21E-27
REG00001	MCM3AP-AS1	MCM3AP antisense RNA 1	HGNC:16417	ENSG00000215424	.	114044	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-1.272781428	knock out	down-regulator	0.003187806
REG00001	TP53TG1	TP53 target 1	HGNC:17026	ENSG00000182165	.	11257	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103494	0.698180813	knock down	up-regulate	0.013963111
REG00001	DGCR11	DiGeorge syndrome critical region gene 11	HGNC:17226	ENSG00000273311	.	25786	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-0.752825332	knock down	down-regulator	0.000537885
REG00001	DIRC3	Disrupted in renal carcinoma 3	HGNC:17805	ENSG00000231672	.	729582	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	1.930268133	knock down	up-regulate	6.88E-11
REG00001	DIRC3	Disrupted in renal carcinoma 3	HGNC:17805	ENSG00000231672	.	729582	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-1.242827945	knock out	down-regulator	7.69E-05
REG00001	CECR7	Cat eye syndrome chromosome region, candidate 7	HGNC:1845	ENSG00000237438	.	100130418	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-1.162600275	knock down	down-regulator	0.0070089
REG00001	LINC00533	Long intergenic non-protein coding RNA 533	HGNC:18690	ENSG00000235570	.	387055	Long non-coding RNA	Long non-coding	HEK293	CVCL_0045	Homo sapiens	Normal	.	CLIP-seq	28977517	GSE79577	.	.	.	.
REG00001	TTTY16	testis-specific transcript, Y-linked 16	HGNC:18840	ENSG00000225520	.	252948	Long non-coding RNA	Long non-coding	HEK293	CVCL_0045	Homo sapiens	Normal	.	CLIP-seq	28977517	GSE79577	.	.	.	.
REG00001	TTTY23	Testis-specific transcript, Y-linked 23	HGNC:18847	ENSG00000239225	.	252955	Long non-coding RNA	Long non-coding	HEK293	CVCL_0045	Homo sapiens	Normal	.	CLIP-seq	28977517	GSE79577	.	.	.	.
REG00001	SNHG32	Small nucleolar RNA host gene 32	HGNC:19078	ENSG00000204387	.	50854	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-1.096989012	knock down	down-regulator	0.007695829
REG00001	TMEM9B-AS1	TMEM9B antisense RNA 1	HGNC:19230	ENSG00000254860	.	493900	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	1.815989401	knock out	up-regulate	7.60E-05
REG00001	KTN1-AS1	KTN1 antisense RNA 1	HGNC:19842	ENSG00000186615	KTAS1_HUMAN	100129075	Long non-coding RNA	Long non-coding	HEK293T	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28002401	GSE78040	-2.453629639	knock down	down-regulator	5.12E-09
REG00001	LINC00520	Long intergenic non-protein coding RNA 520	HGNC:19843	ENSG00000258791	.	645687	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	0.636266788	knock down	up-regulate	0.000523219
REG00001	FAM30A	Family with sequence similarity 30 member A	HGNC:19955	ENSG00000226777	FA30A_HUMAN	9834	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-0.954481637	knock down	down-regulator	0.001250472
REG00001	LINC00239	Long intergenic non-protein coding RNA 239	HGNC:20119	ENSG00000258512	.	145200	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-0.726997868	knock down	down-regulator	0.031496924
REG00001	BDNF-AS	BDNF antisense RNA	HGNC:20608	ENSG00000245573	.	497258	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	0.62896516	knock down	up-regulate	0.013519922
REG00001	SNHG5	Small nucleolar RNA host gene 5	HGNC:21026	ENSG00000203875	.	387066	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103494	-0.676122285	knock down	down-regulator	0.039257335
REG00001	LINC01556	Long intergenic non-protein coding RNA 1556	HGNC:21195	ENSG00000204709	CF100_HUMAN	729583	Long non-coding RNA	Long non-coding	HEK293	CVCL_0045	Homo sapiens	Normal	.	CLIP-seq	28977517	GSE79577	.	.	.	.
REG00001	LINC01558	Long intergenic non-protein coding RNA 1558	HGNC:21235	ENSG00000146521	CF123_HUMAN	26238	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103494	-0.935635532	knock down	down-regulator	0.002630955
REG00001	FAM225B	Family with sequence similarity 225 member B	HGNC:21865	ENSG00000225684	.	100128385	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103494	0.623750825	knock down	up-regulate	0.002361047
REG00001	FAM225B	Family with sequence similarity 225 member B	HGNC:21865	ENSG00000225684	.	100128385	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	0.691880868	knock down	up-regulate	0.035386963
REG00001	PSMG3-AS1	PSMG3 antisense RNA 1 (head to head)	HGNC:22230	ENSG00000230487	K1908_HUMAN	114796	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-1.164635655	knock out	down-regulator	0.000668983
REG00001	HCG4B	HLA complex group 4B	HGNC:22919	ENSG00000227262	.	80868	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103494	-0.996005591	knock down	down-regulator	0.020490418
REG00001	RN7SL2	RNA component of signal recognition particle 7SL2	HGNC:23134	ENSG00000274012	.	378706	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103495	-0.689913326	knock down	down-regulator	0.006219356
REG00001	RN7SL2	RNA component of signal recognition particle 7SL2	HGNC:23134	ENSG00000274012	.	378706	Long non-coding RNA	Long non-coding	TPC-1	CVCL_6298	Homo sapiens	Papillary thyroid cancer	2D10: Thyroid Cancer	RNA-seq	35721711	GSE199206	0.868003836	over expression	up-regulate	0.005686043
REG00001	DHRS4-AS1	DHRS4 antisense RNA 1	HGNC:23175	ENSG00000215256	DHAS1_HUMAN	55449	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-1.826806193	knock out	down-regulator	1.31E-19
REG00001	GSN-AS1	GSN antisense RNA 1	HGNC:23372	ENSG00000235865	GSAS1_HUMAN	57000	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103494	2.230084504	knock down	up-regulate	1.09E-16
REG00001	ZNF503-AS2	ZNF503 antisense RNA 2	HGNC:23525	ENSG00000237149	ZNAS2_HUMAN	100131213	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-0.998625207	knock out	down-regulator	0.042298952
REG00001	LINC00475	Long intergenic non-protein coding RNA 475	HGNC:23569	ENSG00000225511	.	158314	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-0.933776874	knock down	down-regulator	2.90E-16
REG00001	FAM66D	Family with sequence similarity 66 member D	HGNC:24159	ENSG00000255052	.	100132923	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	0.621452643	knock out	up-regulate	0.038800077
REG00001	LINC01554	Long intergenic non-protein coding RNA 1554	HGNC:24687	ENSG00000236882	CE027_HUMAN	202299	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-2.144691626	knock out	down-regulator	0.011906078
REG00001	HOXA11-AS	HOXA11 antisense RNA	HGNC:24957	ENSG00000240990	.	221883	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-0.710585373	knock down	down-regulator	0.026947519
REG00001	LINC00652	Long intergenic non-protein coding RNA 652	HGNC:25003	ENSG00000179935	.	29075	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-1.165241631	knock out	down-regulator	0.000290863
REG00001	LINC00339	Long intergenic non-protein coding RNA 339	HGNC:25011	ENSG00000218510	.	29092	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-0.977320627	knock down	down-regulator	2.47E-26
REG00001	ZNF436-AS1	ZNF436 antisense RNA 1	HGNC:25122	ENSG00000249087	CA213_HUMAN	148898	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103494	-1.227058652	knock down	down-regulator	0.037958543
REG00001	LBX2-AS1	LBX2 antisense RNA 1	HGNC:25136	ENSG00000257702	.	151534	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	0.904926521	knock down	up-regulate	0.001842449
REG00001	ATP6AP1-DT	ATP6AP1 divergent transcript	HGNC:25138	ENSG00000197180	.	158960	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	0.621719276	knock out	up-regulate	7.25E-36
REG00001	EXOC3-AS1	EXOC3 antisense RNA 1	HGNC:25175	ENSG00000221990	EXAS1_HUMAN	116349	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103494	1.088142535	knock down	up-regulate	0.002769938
REG00001	LINC01963	Long intergenic non-protein coding RNA 1963	HGNC:25283	ENSG00000260804	.	150967	Long non-coding RNA	Long non-coding	HEK293T	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28002401	GSE78040	-2.599789761	knock down	down-regulator	0.000516956
REG00001	CEBPA-DT	CEBPA divergent transcript	HGNC:25710	ENSG00000267296	.	80054	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-3.432823781	knock down	down-regulator	0.003600622
REG00001	CEBPA-DT	CEBPA divergent transcript	HGNC:25710	ENSG00000267296	.	80054	Long non-coding RNA	Long non-coding	HEK293T	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28002401	GSE78040	-3.432823781	knock down	down-regulator	0.003600622
REG00001	CEBPA-DT	CEBPA divergent transcript	HGNC:25710	ENSG00000267296	.	80054	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	1.058409064	knock out	up-regulate	0.001178431
REG00001	ASMTL-AS1	ASMTL antisense RNA 1	HGNC:25811	ENSG00000236017	.	80161	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	1.194567319	knock down	up-regulate	0.031159092
REG00001	ASMTL-AS1	ASMTL antisense RNA 1	HGNC:25811	ENSG00000236017	.	80161	Long non-coding RNA	Long non-coding	TPC-1	CVCL_6298	Homo sapiens	Papillary thyroid cancer	2D10: Thyroid Cancer	RNA-seq	35721711	GSE199206	2.0084647	over expression	up-regulate	0.003497358
REG00001	TMEM51-AS1	TMEM51 antisense RNA 1	HGNC:26301	ENSG00000175147	.	200197	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	1.285166501	knock out	up-regulate	0.000119284
REG00001	SSTR5-AS1	SSTR5 antisense RNA 1	HGNC:26502	ENSG00000261713	.	146336	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-0.781420444	knock down	down-regulator	0.048033558
REG00001	LINC00896	Long intergenic non-protein coding RNA 896	HGNC:26519	ENSG00000236499	.	150197	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	0.788199917	knock down	up-regulate	0.000126883
REG00001	FER1L6-AS2	FER1L6 antisense RNA 2	HGNC:26534	ENSG00000253868	FEAS2_HUMAN	157376	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-0.9352862	knock out	down-regulator	0.04398942
REG00001	LINC01559	Long intergenic non-protein coding RNA 1559	HGNC:26598	ENSG00000180861	CL036_HUMAN	283422	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-1.926230358	knock down	down-regulator	0.023382697
REG00001	LINC00324	Long intergenic non-protein coding RNA 324	HGNC:26628	ENSG00000178977	.	284029	Long non-coding RNA	Long non-coding	HEK293	CVCL_0045	Homo sapiens	Normal	.	CLIP-seq	28977517	GSE79577	.	.	.	.
REG00001	LINC01106	Long intergenic non-protein coding RNA 1106	HGNC:26769	ENSG00000175772	.	151009	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-0.84610789	knock down	down-regulator	0.044625066
REG00001	TMEM105	TMEM105 long non-coding RNA	HGNC:26794	ENSG00000185332	TM105_HUMAN	284186	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	1.039830496	knock out	up-regulate	0.019282962
REG00001	TAPT1-AS1	TAPT1 antisense RNA 1 (head to head)	HGNC:26832	ENSG00000263327	.	202020	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	0.718210553	knock out	up-regulate	0.031939049
REG00001	TNFRSF14-AS1	TNFRSF14 antisense RNA 1	HGNC:26966	ENSG00000238164	.	115110	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	2.4557902	knock down	up-regulate	0.00109482
REG00001	SOCS2-AS1	SOCS2 antisense RNA 1	HGNC:27054	ENSG00000246985	.	144481	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103494	-0.800673478	knock down	down-regulator	0.006223841
REG00001	SOCS2-AS1	SOCS2 antisense RNA 1	HGNC:27054	ENSG00000246985	.	144481	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-1.215552625	knock down	down-regulator	0.000671519
REG00001	SOCS2-AS1	SOCS2 antisense RNA 1	HGNC:27054	ENSG00000246985	.	144481	Long non-coding RNA	Long non-coding	HEK293T	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28002401	GSE78040	-0.743742853	knock down	down-regulator	0.004844144
REG00001	SOCS2-AS1	SOCS2 antisense RNA 1	HGNC:27054	ENSG00000246985	.	144481	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-0.682367205	knock out	down-regulator	0.004318813
REG00001	LINC00662	Long intergenic non-protein coding RNA 662	HGNC:27122	ENSG00000261824	.	148189	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-1.648891325	knock down	down-regulator	0.012166663
REG00001	APCDD1L-DT	APCDD1L divergent transcript	HGNC:27152	ENSG00000231290	.	149773	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	0.759016666	knock down	up-regulate	0.029401829
REG00001	ANXA2R-AS1	ANXA2R antisense RNA 1	HGNC:27208	ENSG00000215068	.	153684	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-0.764907344	knock out	down-regulator	0.00902103
REG00001	MIR124-1HG	MIR124-1 host gene	HGNC:27231	ENSG00000253230	.	157627	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	2.010145112	knock out	up-regulate	0.047096848
REG00001	FAM201A	Family with sequence similarity 201 member A	HGNC:27239	ENSG00000204860	F201A_HUMAN	158228	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103494	-1.311354267	knock down	down-regulator	0.009428958
REG00001	FAM201A	Family with sequence similarity 201 member A	HGNC:27239	ENSG00000204860	F201A_HUMAN	158228	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-1.214748414	knock down	down-regulator	0.013889537
REG00001	LINC02870	Long intergenic non-protein coding RNA 2870	HGNC:27275	ENSG00000180066	.	170393	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-0.608601712	knock down	down-regulator	0.00712199
REG00001	TMEM254-AS1	TMEM254 antisense RNA 1	HGNC:27340	ENSG00000230091	.	219347	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-1.925860469	knock out	down-regulator	3.57E-05
REG00001	TOLLIP-DT	TOLLIP divergent transcript	HGNC:27403	ENSG00000255153	.	255512	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	2.088021089	knock down	up-regulate	0.000614643
REG00001	ZMIZ1-AS1	ZMIZ1 antisense RNA 1	HGNC:27433	ENSG00000224596	.	283050	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103494	-1.490366187	knock down	down-regulator	0.035756481
REG00001	WDR11-DT	WDR11 divergent transcript	HGNC:27437	ENSG00000227165	.	283089	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-1.118181272	knock out	down-regulator	9.56E-12
REG00001	LINC02762	Long intergenic non-protein coding RNA 2762	HGNC:27443	ENSG00000250303	.	283140	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	0.928901602	knock down	up-regulate	1.68E-38
REG00001	PRECSIT	P53 regulated carcinoma associated Stat3 activating long intergenic non-protein coding transcript	HGNC:27492	ENSG00000255874	.	283487	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	1.563949212	knock down	up-regulate	0.015248136
REG00001	SNHG10	Small nucleolar RNA host gene 10	HGNC:27510	ENSG00000247092	.	283596	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103494	-1.064585397	knock down	down-regulator	0.006774369
REG00001	LINC00641	Long intergenic non-protein coding RNA 641	HGNC:27511	ENSG00000258441	.	283624	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	0.674413349	knock down	up-regulate	0.004879972
REG00001	LINC00926	Long intergenic non-protein coding RNA 926	HGNC:27514	ENSG00000247982	.	283663	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103494	-1.109031898	knock down	down-regulator	1.16E-05
REG00001	LINC02175	Long intergenic non-protein coding RNA 2175	HGNC:27550	ENSG00000262155	.	283887	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	1.051550517	knock out	up-regulate	0.033834855
REG00001	ZNF561-AS1	ZNF561 antisense RNA 1 (head to head)	HGNC:27613	ENSG00000267106	CS082_HUMAN	284385	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103494	0.821375965	knock down	up-regulate	0.047633079
REG00001	ZNF790-AS1	ZNF790 antisense RNA 1	HGNC:27617	ENSG00000267254	.	284408	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103494	-1.610387052	knock down	down-regulator	0.002825048
REG00001	MIR663AHG	MIR663A host gene	HGNC:27662	ENSG00000227195	.	284801	Long non-coding RNA	Long non-coding	HEK293	CVCL_0045	Homo sapiens	Normal	.	CLIP-seq	28977517	GSE79577	.	.	.	.
REG00001	MIF-AS1	MIF antisense RNA 1	HGNC:27669	ENSG00000218537	.	284889	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	0.659625068	knock down	up-regulate	0.006465002
REG00001	LINC00877	Long intergenic non-protein coding RNA 877	HGNC:27706	ENSG00000241163	.	285286	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103494	-3.647850826	knock down	down-regulator	0.000274528
REG00001	LINC02028	Long intergenic non-protein coding RNA 2028	HGNC:27718	ENSG00000230102	.	285389	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	0.652373475	knock out	up-regulate	0.021381792
REG00001	LINC00174	Long intergenic non-protein coding RNA 174	HGNC:27788	ENSG00000179406	.	285908	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-0.697676084	knock down	down-regulator	0.040470031
REG00001	LINC00174	Long intergenic non-protein coding RNA 174	HGNC:27788	ENSG00000179406	.	285908	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	1.12168603	knock out	up-regulate	0.002547974
REG00001	EPHA1-AS1	EPHA1 antisense RNA 1	HGNC:27799	ENSG00000229153	.	285965	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103494	1.227936698	knock down	up-regulate	0.012185635
REG00001	FAM225A	Family with sequence similarity 225 member A	HGNC:27855	ENSG00000231528	.	286333	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103494	-1.619262997	knock down	down-regulator	0.015513812
REG00001	KRTAP5-AS1	KRTAP5-1/KRTAP5-2 antisense RNA 1	HGNC:27877	ENSG00000233930	.	338651	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	0.687820444	knock out	up-regulate	2.05E-09
REG00001	LINC02693	Long intergenic non-protein coding RNA 2693	HGNC:27904	ENSG00000212719	CQ051_HUMAN	339263	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-1.037002657	knock down	down-regulator	0.034283889
REG00001	FLG-AS1	FLG antisense RNA 1	HGNC:27913	ENSG00000237975	.	339400	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-0.803794432	knock down	down-regulator	0.015052841
REG00001	C2orf74-DT	C2orf74 divergent transcript	HGNC:27941	ENSG00000212978	.	339803	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-0.791791749	knock down	down-regulator	4.56E-05
REG00001	H1-10-AS1	H1-10 antisense RNA 1	HGNC:27953	ENSG00000206417	H1AS1_HUMAN	339942	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	2.585823493	knock down	up-regulate	0.003558467
REG00001	EXTL3-AS1	EXTL3 antisense RNA 1	HGNC:27985	ENSG00000246339	.	101929402	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-0.782681467	knock out	down-regulator	0.026028211
REG00001	MORF4L2-AS1	MORF4L2 antisense RNA 1	HGNC:27991	ENSG00000231154	.	340544	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103494	1.478805289	knock down	up-regulate	0.017554763
REG00001	LINC00265	Long intergenic non-protein coding RNA 265	HGNC:28019	ENSG00000188185	.	349114	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	0.864102917	knock down	up-regulate	5.82E-08
REG00001	OLMALINC	Oligodendrocyte maturation-associated long intergenic non-coding RNA	HGNC:28060	ENSG00000235823	.	90271	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103494	-1.354787759	knock down	down-regulator	0.000191027
REG00001	OLMALINC	Oligodendrocyte maturation-associated long intergenic non-coding RNA	HGNC:28060	ENSG00000235823	.	90271	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-0.635150836	knock down	down-regulator	0.002341224
REG00001	TENM3-AS1	TENM3 antisense RNA 1	HGNC:28076	ENSG00000177822	.	90768	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	0.989663025	knock down	up-regulate	0.000839638
REG00001	GCC2-AS1	GCC2 antisense RNA 1	HGNC:28126	ENSG00000214184	.	644903	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103495	-1.581310154	knock down	down-regulator	2.34E-11
REG00001	DLGAP1-AS2	DLGAP1 antisense RNA 2	HGNC:28146	ENSG00000262001	.	84777	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-1.008559429	knock down	down-regulator	1.05E-06
REG00001	MIR22HG	MIR22 host gene	HGNC:28219	ENSG00000186594	CQ091_HUMAN	84981	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103494	0.872416625	knock down	up-regulate	0.001986309
REG00001	MIR22HG	MIR22 host gene	HGNC:28219	ENSG00000186594	CQ091_HUMAN	84981	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-0.756997537	knock down	down-regulator	0.035493961
REG00001	MIR22HG	MIR22 host gene	HGNC:28219	ENSG00000186594	CQ091_HUMAN	84981	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	0.58564144	knock out	up-regulate	0.000641482
REG00001	LINC00467	Long intergenic non-protein coding RNA 467	HGNC:28227	ENSG00000153363	.	84791	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-1.174628586	knock down	down-regulator	1.03E-38
REG00001	LINC00467	Long intergenic non-protein coding RNA 467	HGNC:28227	ENSG00000153363	.	84791	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	1.483432873	knock out	up-regulate	5.78E-20
REG00001	SNHG7	Small nucleolar RNA host gene 7	HGNC:28254	ENSG00000233016	.	84973	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103494	-0.982801899	knock down	down-regulator	0.005424395
REG00001	GLIS3-AS1	GLIS3 antisense RNA 1	HGNC:28260	ENSG00000237009	.	84850	Long non-coding RNA	Long non-coding	HEK293	CVCL_0045	Homo sapiens	Normal	.	CLIP-seq	28977517	GSE79577	.	.	.	.
REG00001	ATP1A1-AS1	ATP1A1 antisense RNA 1	HGNC:28262	ENSG00000203865	ATAS1_HUMAN	84852	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103495	-1.19487858	knock down	down-regulator	7.04E-28
REG00001	LINC00638	Long intergenic non-protein coding RNA 638	HGNC:28325	ENSG00000258701	.	196872	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	1.584269474	knock out	up-regulate	3.70E-11
REG00001	CIRBP-AS1	CIRBP antisense RNA 1	HGNC:28588	ENSG00000267493	CSAS1_HUMAN	148046	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-0.882937052	knock down	down-regulator	0.043063816
REG00001	LINC00663	Long intergenic non-protein coding RNA 663	HGNC:28609	ENSG00000266904	.	284440	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	0.681805143	knock out	up-regulate	0.029457327
REG00001	SNHG29	Small nucleolar RNA host gene 29	HGNC:28619	ENSG00000175061	.	125144	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-1.000399311	knock down	down-regulator	0.007500241
REG00001	FAM27E3	Family with sequence similarity 27 member E3	HGNC:28655	ENSG00000274026	F27E3_HUMAN	100131997	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	1.526726621	knock down	up-regulate	0.028546681
REG00001	FAM66B	Family with sequence similarity 66 member B	HGNC:28890	ENSG00000215374	.	100128890	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	0.814933684	knock out	up-regulate	0.006039825
REG00001	DANCR	Differentiation antagonizing non-protein coding RNA	HGNC:28964	ENSG00000226950	DANCR_HUMAN	57291	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103494	-1.171544661	knock down	down-regulator	9.52E-05
REG00001	TP73-AS1	TP73 antisense RNA 1	HGNC:29052	ENSG00000227372	.	57212	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-3.09634654	knock down	down-regulator	0.000841287
REG00001	TP73-AS1	TP73 antisense RNA 1	HGNC:29052	ENSG00000227372	.	57212	Long non-coding RNA	Long non-coding	TPC-1	CVCL_6298	Homo sapiens	Papillary thyroid cancer	2D10: Thyroid Cancer	RNA-seq	35721711	GSE199206	-3.021503874	over expression	down-regulator	0.001048906
REG00001	TYMSOS	TYMS opposite strand RNA	HGNC:29553	ENSG00000176912	TYMOS_HUMAN	494514	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103494	-0.888956567	knock down	down-regulator	0.000333198
REG00001	MALAT1	Metastasis associated lung adenocarcinoma transcript 1	HGNC:29665	ENSG00000251562	.	378938	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103494	-1.874731033	knock down	down-regulator	0.000618726
REG00001	GATD1-DT	GATD1 divergent transcript	HGNC:29907	ENSG00000255284	.	171391	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	0.798722443	knock down	up-regulate	0.003420185
REG00001	GATD1-DT	GATD1 divergent transcript	HGNC:29907	ENSG00000255284	.	171391	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-1.917027185	knock out	down-regulator	8.16E-08
REG00001	MIR7-3HG	MIR7-3 host gene	HGNC:30049	ENSG00000176840	PGSF1_HUMAN	284424	Long non-coding RNA	Long non-coding	HEK293T	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28002401	GSE78040	0.614878731	knock down	up-regulate	0.048042352
REG00001	MIR7-3HG	MIR7-3 host gene	HGNC:30049	ENSG00000176840	PGSF1_HUMAN	284424	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	0.720583144	knock out	up-regulate	0.043666586
REG00001	FAM66A	Family with sequence similarity 66 member A	HGNC:30444	ENSG00000227888	.	100133172	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-2.313528117	knock out	down-regulator	0.007774677
REG00001	EPB41L4A-AS1	EPB41L4A antisense RNA 1	HGNC:30749	ENSG00000224032	.	114915	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103494	0.599629551	knock down	up-regulate	0.023334241
REG00001	EPB41L4A-AS1	EPB41L4A antisense RNA 1	HGNC:30749	ENSG00000224032	.	114915	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-0.782853529	knock down	down-regulator	0.000341315
REG00001	MIR9-1HG	MIR9-1 host gene	HGNC:30780	ENSG00000125462	CROC4_HUMAN	10485	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-1.040393663	knock out	down-regulator	3.51E-05
REG00001	NEAT1	Nuclear paraspeckle assembly transcript 1	HGNC:30815	ENSG00000245532	.	283131	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103494	0.818171383	knock down	up-regulate	4.03E-05
REG00001	NEAT1	Nuclear paraspeckle assembly transcript 1	HGNC:30815	ENSG00000245532	.	283131	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103495	-0.837137268	knock down	down-regulator	1.39E-05
REG00001	NEAT1	Nuclear paraspeckle assembly transcript 1	HGNC:30815	ENSG00000245532	.	283131	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-0.956240127	knock down	down-regulator	0.006130078
REG00001	IDI2-AS1	IDI2 antisense RNA 1	HGNC:30885	ENSG00000232656	IDAS1_HUMAN	55853	Long non-coding RNA	Long non-coding	TPC-1	CVCL_6298	Homo sapiens	Papillary thyroid cancer	2D10: Thyroid Cancer	RNA-seq	35721711	GSE199206	1.013042246	over expression	up-regulate	0.03512959
REG00001	HCG17	HLA complex group 17	HGNC:31339	ENSG00000270604	.	414778	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	0.773660628	knock out	up-regulate	0.011827635
REG00001	LINC00595	Long intergenic non-protein coding RNA 595	HGNC:31430	ENSG00000230417	.	414243	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-3.52339737	knock down	down-regulator	1.22E-07
REG00001	MIR1915HG	MIR1915 host gene	HGNC:31448	ENSG00000204682	CSC10_HUMAN	399726	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-0.721525938	knock out	down-regulator	0.00365801
REG00001	DLGAP1-AS1	DLGAP1 antisense RNA 1	HGNC:31676	ENSG00000177337	.	649446	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103494	-1.827541978	knock down	down-regulator	0.036983307
REG00001	MIR4527HG	MIR4527 host gene	HGNC:31724	ENSG00000267761	.	110175910	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-1.781403752	knock down	down-regulator	0.049115367
REG00001	UCKL1-AS1	UCKL1 antisense RNA 1	HGNC:31967	ENSG00000280213	.	100113386	Long non-coding RNA	Long non-coding	HEK293T	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28002401	GSE78040	-1.826043077	knock down	down-regulator	0.020214758
REG00001	IBA57-DT	IBA57 divergent transcript	HGNC:32062	ENSG00000203684	IBADT_HUMAN	574432	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	0.585440529	knock down	up-regulate	0.006082714
REG00001	FAM85B	Family with sequence similarity 85 member B	HGNC:32160	ENSG00000253893	.	105379219	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-1.266934552	knock out	down-regulator	0.048403303
REG00001	FAM87B	Family with sequence similarity 87 member B	HGNC:32236	ENSG00000177757	.	400728	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-0.856292137	knock down	down-regulator	0.002424073
REG00001	LINC00488	Long intergenic non-protein coding RNA 488	HGNC:32675	ENSG00000214381	.	677779	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-1.202912093	knock down	down-regulator	3.13E-07
REG00001	SNHG1	Small nucleolar RNA host gene 1	HGNC:32688	ENSG00000255717	.	23642	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103494	-1.175584124	knock down	down-regulator	0.000877728
REG00001	SNHG4	Small nucleolar RNA host gene 4	HGNC:32964	ENSG00000281398	.	724102	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103494	-0.950733335	knock down	down-regulator	0.00236721
REG00001	SNHG4	Small nucleolar RNA host gene 4	HGNC:32964	ENSG00000281398	.	724102	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-1.065006836	knock down	down-regulator	0.001999795
REG00001	SNHG6	Small nucleolar RNA host gene 6	HGNC:32965	ENSG00000245910	.	641638	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103494	-0.611040872	knock down	down-regulator	0.045066743
REG00001	SNHG8	Small nucleolar RNA host gene 8	HGNC:33098	ENSG00000269893	.	100093630	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-1.039967248	knock down	down-regulator	0.002487915
REG00001	ZFAS1	ZNFX1 antisense RNA 1	HGNC:33101	ENSG00000177410	.	441951	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	1.860932185	knock down	up-regulate	0.007325529
REG00001	HAR1A	Highly accelerated region 1A	HGNC:33117	ENSG00000225978	.	768096	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-0.763705695	knock down	down-regulator	0.000554669
REG00001	HAR1B	Highly accelerated region 1B	HGNC:33118	ENSG00000231133	.	768097	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	0.674279318	knock down	up-regulate	0.010419024
REG00001	HOTAIR	HOX transcript antisense RNA	HGNC:33510	ENSG00000228630	.	100124700	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-0.677092857	knock down	down-regulator	0.024335807
REG00001	PAPPA-AS2	PAPPA antisense RNA 2	HGNC:35160	ENSG00000226604	.	103611155	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-1.156041979	knock down	down-regulator	0.004283881
REG00001	MIR4435-2HG	MIR4435-2 host gene	HGNC:35163	ENSG00000172965	.	541471	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103494	2.618774211	knock down	up-regulate	0.002514361
REG00001	CRNDE	Colorectal neoplasia differentially expressed	HGNC:37078	ENSG00000245694	.	643911	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	0.913771637	knock down	up-regulate	0.006682713
REG00001	BACE1-AS	BACE1 antisense RNA	HGNC:37125	ENSG00000278768	.	100379571	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	1.603346361	knock down	up-regulate	0.038004297
REG00001	UCA1	Urothelial cancer associated 1	HGNC:37126	ENSG00000214049	.	652995	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-1.797213748	knock down	down-regulator	2.09E-05
REG00001	DLX6-AS1	DLX6 antisense RNA 1	HGNC:37151	ENSG00000231764	.	285987	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-1.203216561	knock out	down-regulator	0.003104319
REG00001	SNHG14	Small nucleolar RNA host gene 14	HGNC:37462	ENSG00000224078	.	104472715	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-1.003040964	knock out	down-regulator	0.015370843
REG00001	WASIR1	WASH and IL9R antisense RNA 1	HGNC:38513	ENSG00000185203	.	100128260	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	1.496621124	knock down	up-regulate	0.025523763
REG00001	LINC00273	Long intergenic non-protein coding RNA 273	HGNC:38595	ENSG00000256642	.	649159	Long non-coding RNA	Long non-coding	HEK293	CVCL_0045	Homo sapiens	Normal	.	CLIP-seq	28977517	GSE79577	.	.	.	.
REG00001	WASIR2	WASH and IL9R antisense RNA 2	HGNC:38609	ENSG00000231439	.	100132169	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	1.169885062	knock down	up-regulate	1.52E-08
REG00001	WASIR2	WASH and IL9R antisense RNA 2	HGNC:38609	ENSG00000231439	.	100132169	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-1.05062152	knock out	down-regulator	1.63E-10
REG00001	ELFN1-AS1	ELFN1 antisense RNA 1	HGNC:39071	ENSG00000236081	.	101927125	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-1.073630452	knock down	down-regulator	0.000126435
REG00001	MIR100HG	Mir-100-let-7a-2-mir-125b-1 cluster host gene	HGNC:39522	ENSG00000255248	.	399959	Long non-coding RNA	Long non-coding	HEK293	CVCL_0045	Homo sapiens	Normal	.	CLIP-seq	28977517	GSE79577	.	.	.	.
REG00001	MIR100HG	Mir-100-let-7a-2-mir-125b-1 cluster host gene	HGNC:39522	ENSG00000255248	.	399959	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	0.60681066	knock down	up-regulate	0.01095472
REG00001	MIR100HG	Mir-100-let-7a-2-mir-125b-1 cluster host gene	HGNC:39522	ENSG00000255248	.	399959	Long non-coding RNA	Long non-coding	TPC-1	CVCL_6298	Homo sapiens	Papillary thyroid cancer	2D10: Thyroid Cancer	RNA-seq	35721711	GSE199206	-0.899609084	over expression	down-regulator	0.00068455
REG00001	MIR210HG	MIR210 host gene	HGNC:39524	ENSG00000247095	.	100506211	Long non-coding RNA	Long non-coding	TPC-1	CVCL_6298	Homo sapiens	Papillary thyroid cancer	2D10: Thyroid Cancer	RNA-seq	35721711	GSE199206	-1.197930939	over expression	down-regulator	0.000127201
REG00001	MIR210HG	MIR210 host gene	HGNC:39524	ENSG00000247095	.	100506211	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-1.151013853	knock out	down-regulator	0.001896326
REG00001	PAXBP1-AS1	PAXBP1 antisense RNA 1	HGNC:39603	ENSG00000238197	.	100506215	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	0.818238088	knock out	up-regulate	0.000757918
REG00001	PSMB8-AS1	PSMB8 antisense RNA 1 (head to head)	HGNC:39758	ENSG00000204261	.	100507463	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103494	-1.123040697	knock down	down-regulator	0.000454778
REG00001	MDC1-AS1	MDC1 antisense RNA 1	HGNC:39764	ENSG00000224328	.	106478956	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-0.926602898	knock out	down-regulator	2.12E-06
REG00001	SOX21-AS1	SOX21 antisense divergent transcript 1	HGNC:39807	ENSG00000227640	.	100507533	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-1.526800299	knock out	down-regulator	0.000253874
REG00001	GAS6-AS1	GAS6 antisense RNA 1	HGNC:39826	ENSG00000233695	.	650669	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	0.779608575	knock down	up-regulate	1.50E-05
REG00001	C1QTNF9B-AS1	Prostate and testis expressed opposite C1QTNF9B and MIPEP	HGNC:39839	ENSG00000205861	PCOTH_HUMAN	542767	Long non-coding RNA	Long non-coding	HEK293	CVCL_0045	Homo sapiens	Normal	.	CLIP-seq	28977517	GSE79577	.	.	.	.
REG00001	ANKRD10-IT1	ANKRD10 intronic transcript 1	HGNC:39891	ENSG00000229152	.	100505494	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-0.77116963	knock down	down-regulator	0.039171607
REG00001	PAN3-AS1	PAN3 antisense RNA 1	HGNC:39932	ENSG00000261485	.	100288730	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	2.272807116	knock down	up-regulate	0.023047306
REG00001	TRAF3IP2-AS1	TRAF3IP2 antisense RNA 1	HGNC:40005	ENSG00000231889	.	643749	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103494	-2.220090496	knock down	down-regulator	0.028277794
REG00001	MRAP-AS1	MRAP antisense RNA 1	HGNC:40108	ENSG00000232623	.	105372779	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	1.354513065	knock out	up-regulate	0.006267767
REG00001	CHKB-DT	CHKB divergent transcript	HGNC:40146	ENSG00000205559	.	100144603	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	0.705342916	knock out	up-regulate	0.049384616
REG00001	DARS1-AS1	DARS1 antisense RNA 1	HGNC:40170	ENSG00000231890	.	101928243	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	0.949497547	knock out	up-regulate	0.005243974
REG00001	EIF1AX-AS1	EIF1AX antisense RNA 1	HGNC:40208	ENSG00000225037	.	100874078	Long non-coding RNA	Long non-coding	HEK293T	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28002401	GSE78040	1.3616478	knock down	up-regulate	4.21E-06
REG00001	ELN-AS1	ELN antisense RNA 1	HGNC:40212	ENSG00000232415	.	107986809	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-0.649792103	knock down	down-regulator	0.004419426
REG00001	HOXA10-AS	HOXA10 antisense RNA	HGNC:40281	ENSG00000253187	.	100874323	Long non-coding RNA	Long non-coding	HEK293T	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28002401	GSE78040	-1.053845088	knock down	down-regulator	1.33E-05
REG00001	HOXB-AS3	HOXB cluster antisense RNA 3	HGNC:40283	ENSG00000233101	HAS3P_HUMAN	404266	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-1.512526494	knock out	down-regulator	0.000100599
REG00001	LGALS8-AS1	LGALS8 antisense RNA 1	HGNC:40340	ENSG00000223776	.	100287902	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-3.329082346	knock down	down-regulator	0.039274196
REG00001	MELTF-AS1	MELTF antisense RNA 1	HGNC:40373	ENSG00000228109	.	100507057	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-1.689643149	knock down	down-regulator	0.009746698
REG00001	NFIA-AS1	NFIA antisense RNA 1	HGNC:40402	ENSG00000237853	.	645030	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	0.732434199	knock out	up-regulate	0.019851943
REG00001	NINJ2-AS1	NINJ2 antisense RNA 1	HGNC:40405	ENSG00000177406	.	100049716	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-0.677063049	knock down	down-regulator	1.09E-06
REG00001	PLXNB3-AS1	PLXNB3 antisense RNA 1	HGNC:40454	ENSG00000232725	.	102723591	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-0.94275357	knock out	down-regulator	0.016672613
REG00001	SLCO4A1-AS1	SLCO4A1 antisense RNA 1	HGNC:40537	ENSG00000232803	.	100127888	Long non-coding RNA	Long non-coding	TPC-1	CVCL_6298	Homo sapiens	Papillary thyroid cancer	2D10: Thyroid Cancer	RNA-seq	35721711	GSE199206	-0.700789537	over expression	down-regulator	5.63E-05
REG00001	LINC01424	Long intergenic non-protein coding RNA 1424	HGNC:40558	ENSG00000236519	.	101928689	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-0.653364487	knock out	down-regulator	0.034042841
REG00001	TFAP2A-AS1	TFAP2A antisense RNA 1	HGNC:40579	ENSG00000229950	.	100130275	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103494	1.121672664	knock down	up-regulate	0.001709937
REG00001	BRWD1-AS1	BRWD1 antisense RNA 1	HGNC:40614	ENSG00000238141	.	100874093	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-0.677030416	knock out	down-regulator	1.11E-05
REG00001	NEUROG2-AS1	NEUROG2 and ZGRF1 antisense RNA 1	HGNC:40656	ENSG00000249509	.	105377372	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-0.892926818	knock out	down-regulator	0.004028626
REG00001	SIGLEC10-AS1	SIGLEC10 antisense RNA 1	HGNC:40719	ENSG00000255441	.	100129083	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	0.971516463	knock out	up-regulate	0.005858563
REG00001	LMLN-AS1	LMLN antisense RNA 1	HGNC:40738	ENSG00000232832	.	100873947	Long non-coding RNA	Long non-coding	TPC-1	CVCL_6298	Homo sapiens	Papillary thyroid cancer	2D10: Thyroid Cancer	RNA-seq	35721711	GSE199206	1.953598849	over expression	up-regulate	0.006233858
REG00001	LMLN-AS1	LMLN antisense RNA 1	HGNC:40738	ENSG00000232832	.	100873947	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	1.953598849	knock out	up-regulate	0.006233858
REG00001	COA6-AS1	COA6 antisense RNA 1	HGNC:40825	ENSG00000231663	.	101927765	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-0.995457585	knock down	down-regulator	0.003915227
REG00001	ST3GAL6-AS1	ST3GAL6 antisense RNA 1	HGNC:40828	ENSG00000239445	.	100874207	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-2.469288223	knock out	down-regulator	0.011493421
REG00001	DAAM2-AS1	DAAM2 antisense RNA 1	HGNC:40830	ENSG00000235033	.	100505635	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	0.860557792	knock out	up-regulate	0.011281936
REG00001	MDN1-AS1	MDN1 antisense RNA 1	HGNC:40837	ENSG00000228124	.	101929057	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-0.916075891	knock out	down-regulator	5.17E-07
REG00001	MAGI2-AS3	MAGI2 antisense RNA 3	HGNC:40862	ENSG00000234456	.	100505881	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	0.638857437	knock down	up-regulate	0.003896756
REG00001	MTUS2-AS1	MTUS2 antisense RNA 1	HGNC:40924	ENSG00000179141	.	100874107	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	0.81932508	knock out	up-regulate	0.001777925
REG00001	MID1IP1-AS1	MID1IP1 antisense RNA 1	HGNC:40932	ENSG00000238123	.	100874211	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	0.674988072	knock down	up-regulate	0.028996637
REG00001	MID1IP1-AS1	MID1IP1 antisense RNA 1	HGNC:40932	ENSG00000238123	.	100874211	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	1.042712436	knock out	up-regulate	0.004180339
REG00001	NHSL1-AS1	NHSL1 antisense RNA 1	HGNC:40947	ENSG00000225177	.	441172	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	0.599737872	knock down	up-regulate	0.002599236
REG00001	FKBP14-AS1	FKBP14 antisense RNA 1	HGNC:40990	ENSG00000227014	.	105375215	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	3.44430466	knock out	up-regulate	1.41E-35
REG00001	A2ML1-AS1	A2ML1 antisense RNA 1	HGNC:41022	ENSG00000256661	.	100874108	Long non-coding RNA	Long non-coding	TPC-1	CVCL_6298	Homo sapiens	Papillary thyroid cancer	2D10: Thyroid Cancer	RNA-seq	35721711	GSE199206	0.917692798	over expression	up-regulate	0.004577838
REG00001	C5orf34-AS1	C5orf34 antisense RNA 1	HGNC:41061	ENSG00000248554	.	105374749	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-1.37358731	knock down	down-regulator	8.91E-08
REG00001	MMADHC-DT	MMADHC divergent transcript	HGNC:41087	ENSG00000231969	.	101929231	Long non-coding RNA	Long non-coding	HEK293T	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28002401	GSE78040	1.137388915	knock down	up-regulate	0.008103275
REG00001	AGBL5-AS1	AGBL5 antisense RNA 1	HGNC:41133	ENSG00000231636	.	100874031	Long non-coding RNA	Long non-coding	HEK293T	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28002401	GSE78040	7.908676983	knock down	up-regulate	2.66E-10
REG00001	DCST1-AS1	DCST1 antisense RNA 1	HGNC:41147	ENSG00000232093	.	100505666	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	0.609638084	knock down	up-regulate	0.014275324
REG00001	DCST1-AS1	DCST1 antisense RNA 1	HGNC:41147	ENSG00000232093	.	100505666	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	0.593719236	knock out	up-regulate	0.005114611
REG00001	CNIH3-AS2	CNIH3 antisense RNA 2	HGNC:41162	ENSG00000233384	.	102723817	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-2.842012022	knock down	down-regulator	0.001238055
REG00001	CNIH3-AS2	CNIH3 antisense RNA 2	HGNC:41162	ENSG00000233384	.	102723817	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-1.358060052	knock out	down-regulator	0.047697064
REG00001	ZFAND2A-DT	ZFAND2A divergent transcript	HGNC:41187	ENSG00000229043	.	101927021	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-0.655592229	knock out	down-regulator	8.03E-05
REG00001	LMNTD2-AS1	LMNTD2 antisense RNA 1	HGNC:41204	ENSG00000254815	.	692247	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	3.509586909	knock down	up-regulate	0.004505254
REG00001	ARHGAP31-AS1	ARHGAP31 antisense RNA 1	HGNC:41235	ENSG00000241155	.	100874246	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103494	-1.02138202	knock down	down-regulator	0.029180728
REG00001	ALMS1-IT1	ALMS1 intronic transcript 1	HGNC:41305	ENSG00000230002	.	100874291	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-0.608522384	knock down	down-regulator	0.008791946
REG00001	RHOA-IT1	RHOA intronic transcript 1	HGNC:41308	ENSG00000235908	.	106480739	Long non-coding RNA	Long non-coding	TPC-1	CVCL_6298	Homo sapiens	Papillary thyroid cancer	2D10: Thyroid Cancer	RNA-seq	35721711	GSE199206	0.642102489	over expression	up-regulate	0.001198662
REG00001	SYNJ2-IT1	SYNJ2 intronic transcript 1	HGNC:41387	ENSG00000233496	.	100874300	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103494	-1.454251286	knock down	down-regulator	0.019092991
REG00001	HECW1-IT1	HECW1 intronic transcript 1	HGNC:41465	ENSG00000181211	.	100127950	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	1.077456292	knock out	up-regulate	0.005025913
REG00001	AGBL5-IT1	AGBL5 intronic transcript 1	HGNC:41484	ENSG00000229122	.	106481744	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	9.316552753	knock down	up-regulate	0.017113224
REG00001	LINC00327	Long intergenic non-protein coding RNA 327	HGNC:42009	ENSG00000232977	.	100506697	Long non-coding RNA	Long non-coding	TPC-1	CVCL_6298	Homo sapiens	Papillary thyroid cancer	2D10: Thyroid Cancer	RNA-seq	35721711	GSE199206	-2.320068497	over expression	down-regulator	4.10E-57
REG00001	UBAC2-AS1	UBAC2 antisense RNA 1	HGNC:42502	ENSG00000228889	.	100289373	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-1.440286991	knock down	down-regulator	0.010376913
REG00001	LINC00365	Long intergenic non-protein coding RNA 365	HGNC:42687	ENSG00000224511	.	100874146	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	0.793371471	knock down	up-regulate	0.001358466
REG00001	INTS6-AS1	INTS6 antisense RNA 1	HGNC:42691	ENSG00000236778	.	100507398	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-1.214998926	knock down	down-regulator	1.05E-06
REG00001	INTS6-AS1	INTS6 antisense RNA 1	HGNC:42691	ENSG00000236778	.	100507398	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-0.671307386	knock out	down-regulator	0.001391017
REG00001	LINC00399	Long intergenic non-protein coding RNA 399	HGNC:42728	ENSG00000229792	.	104326054	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103494	1.294085098	knock down	up-regulate	0.006600644
REG00001	SOX1-OT	SOX1 overlapping transcript	HGNC:42733	ENSG00000224243	.	100505996	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-0.788145796	knock out	down-regulator	0.013622539
REG00001	LINC00434	Long intergenic non-protein coding RNA 434	HGNC:42769	ENSG00000227336	.	100874169	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	1.085448668	knock out	up-regulate	0.001351132
REG00001	LINC00446	Long intergenic non-protein coding RNA 446	HGNC:42783	ENSG00000229249	.	100874175	Long non-coding RNA	Long non-coding	HEK293	CVCL_0045	Homo sapiens	Normal	.	CLIP-seq	28977517	GSE79577	.	.	.	.
REG00001	LINC00461	Long intergenic non-protein coding RNA 461	HGNC:42810	ENSG00000245526	.	645323	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-4.021662019	knock down	down-regulator	2.26E-108
REG00001	DICER1-AS1	DICER1 antisense RNA 1	HGNC:43017	ENSG00000235706	.	400242	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-1.374036813	knock down	down-regulator	8.49E-05
REG00001	KLHL7-DT	KLHL7 divergent transcript	HGNC:43431	ENSG00000230658	.	100775104	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	1.307481346	knock out	up-regulate	1.35E-26
REG00001	P4HA2-AS1	P4HA2 antisense RNA 1	HGNC:43560	ENSG00000237714	.	100861518	Long non-coding RNA	Long non-coding	TPC-1	CVCL_6298	Homo sapiens	Papillary thyroid cancer	2D10: Thyroid Cancer	RNA-seq	35721711	GSE199206	-0.870311684	over expression	down-regulator	0.001583409
REG00001	LINC00511	Long intergenic non-protein coding RNA 511	HGNC:43564	ENSG00000227036	.	400619	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	1.473480547	knock out	up-regulate	1.69E-09
REG00001	GDNF-AS1	GDNF antisense RNA 1	HGNC:43592	ENSG00000248587	.	100861519	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	0.887849733	knock out	up-regulate	0.000291676
REG00001	ZRANB2-AS1	ZRANB2 antisense RNA 1	HGNC:43594	ENSG00000235079	.	100132618	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-1.632716174	knock out	down-regulator	0.032814672
REG00001	ZRANB2-DT	ZRANB2 divergent transcript	HGNC:43595	ENSG00000229956	.	100852410	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	2.426883229	knock out	up-regulate	0.00053981
REG00001	HMBOX1-IT1	HMBOX1 intronic transcript 1	HGNC:43632	ENSG00000259196	.	106481795	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	0.662720313	knock out	up-regulate	0.003512571
REG00001	MILIP	MYC inducible lncRNA inactivating p53	HGNC:43649	ENSG00000265688	.	92659	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-0.668461917	knock out	down-regulator	0.01518895
REG00001	PROX1-AS1	PROX1 antisense RNA 1	HGNC:43656	ENSG00000230461	.	100505832	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-0.698429837	knock out	down-regulator	0.006433038
REG00001	DOCK9-DT	DOCK9 divergent transcript	HGNC:43696	ENSG00000260992	.	100861541	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-1.380521475	knock down	down-regulator	9.36E-05
REG00001	SWINGN	SWI/SNF complex interacting GAS6 enhancer non-coding RNA	HGNC:43709	ENSG00000260910	.	100861555	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-0.994663923	knock down	down-regulator	0.04408219
REG00001	FALEC	Focally amplified long non-coding RNA in epithelial cancer	HGNC:43713	ENSG00000228126	.	100874054	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	0.984249579	knock out	up-regulate	0.000145854
REG00001	CYP4A22-AS1	CYP4A22 antisense RNA 1	HGNC:43715	ENSG00000225506	.	104355148	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	1.110732025	knock out	up-regulate	0.013666342
REG00001	LINC00853	Long intergenic non-protein coding RNA 853	HGNC:43716	ENSG00000224805	.	100874253	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-1.150790697	knock down	down-regulator	0.000693188
REG00001	LINC00853	Long intergenic non-protein coding RNA 853	HGNC:43716	ENSG00000224805	.	100874253	Long non-coding RNA	Long non-coding	HEK293T	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28002401	GSE78040	-2.389094829	knock down	down-regulator	0.047547654
REG00001	HOXB-AS1	HOXB cluster antisense RNA 1	HGNC:43744	ENSG00000230148	.	100874362	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-0.685036784	knock down	down-regulator	0.007216211
REG00001	HOXC-AS2	HOXC cluster antisense RNA 2	HGNC:43750	ENSG00000250133	.	100874364	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-1.507624592	knock out	down-regulator	0.002113221
REG00001	FTO-IT1	FTO intronic transcript 1	HGNC:43758	.	.	100505692	Long non-coding RNA	Long non-coding	HEK293	CVCL_0045	Homo sapiens	Normal	.	CLIP-seq	28977517	GSE79577	.	.	.	.
REG00001	TMEM161B-DT	TMEM161B divergent transcript	HGNC:43839	ENSG00000247828	.	100505894	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-0.721857089	knock down	down-regulator	0.00121606
REG00001	FENDRR	FOXF1 adjacent non-coding developmental regulatory RNA	HGNC:43894	ENSG00000268388	.	400550	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	0.65088468	knock out	up-regulate	0.001516004
REG00001	CD27-AS1	CD27 antisense RNA 1	HGNC:43896	ENSG00000215039	.	678655	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-3.600561534	knock down	down-regulator	0.000156461
REG00001	CD27-AS1	CD27 antisense RNA 1	HGNC:43896	ENSG00000215039	.	678655	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-1.543277812	knock out	down-regulator	0.025501111
REG00001	LINC00601	Long intergenic non-protein coding RNA 601	HGNC:43916	ENSG00000235180	.	101101772	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-1.894531813	knock down	down-regulator	1.88E-12
REG00001	USP46-DT	USP46 divergent transcript	HGNC:43991	ENSG00000248866	.	643783	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	1.104217474	knock out	up-regulate	0.002390713
REG00001	TUNAR	TCL1 upstream neural differentiation-associated RNA	HGNC:44088	ENSG00000250366	TUNAR_HUMAN	100507043	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	0.750174958	knock out	up-regulate	0.00548093
REG00001	BCDIN3D-AS1	BCDIN3D antisense RNA 1	HGNC:44113	ENSG00000258057	.	100286844	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	1.154191279	knock out	up-regulate	0.001419944
REG00001	STARD4-AS1	STARD4 antisense RNA 1	HGNC:44117	ENSG00000246859	.	100505678	Long non-coding RNA	Long non-coding	TPC-1	CVCL_6298	Homo sapiens	Papillary thyroid cancer	2D10: Thyroid Cancer	RNA-seq	35721711	GSE199206	-0.750908255	over expression	down-regulator	0.004081611
REG00001	NAPA-AS1	NAPA antisense RNA 1	HGNC:44118	ENSG00000268061	.	100505681	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	1.031549602	knock down	up-regulate	0.000854765
REG00001	PSMD6-AS2	PSMD6 antisense RNA 2	HGNC:44125	ENSG00000239653	.	100507062	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-0.675491775	knock down	down-regulator	0.014969132
REG00001	ACVR2B-AS1	ACVR2B antisense RNA 1	HGNC:44161	ENSG00000229589	.	100128640	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-0.829123023	knock out	down-regulator	0.000476344
REG00001	SRRM2-AS1	SRRM2 antisense RNA 1	HGNC:44162	ENSG00000205913	.	100128788	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-0.818661882	knock down	down-regulator	0.029101784
REG00001	SRRM2-AS1	SRRM2 antisense RNA 1	HGNC:44162	ENSG00000205913	.	100128788	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-0.793817251	knock out	down-regulator	0.020305213
REG00001	PCED1B-AS1	PCED1B antisense RNA 1	HGNC:44166	ENSG00000247774	.	100233209	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103494	-0.811776343	knock down	down-regulator	0.009259463
REG00001	LOXL1-AS1	LOXL1 antisense RNA 1	HGNC:44169	ENSG00000261801	.	100287616	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103494	-1.569768122	knock down	down-regulator	0.000524061
REG00001	LOXL1-AS1	LOXL1 antisense RNA 1	HGNC:44169	ENSG00000261801	.	100287616	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-1.304995681	knock down	down-regulator	2.41E-05
REG00001	RASAL2-AS1	RASAL2 antisense RNA 1	HGNC:44170	ENSG00000224687	.	100302401	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-0.819420483	knock down	down-regulator	0.024599678
REG00001	SENCR	Smooth muscle and endothelial cell enriched migration/differentiation-associated lncRNA	HGNC:44177	ENSG00000254703	.	100507392	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103494	-1.276725028	knock down	down-regulator	0.00116041
REG00001	RAB11B-AS1	RAB11B antisense RNA 1	HGNC:44178	ENSG00000269386	.	100507567	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-0.967063415	knock down	down-regulator	0.004974413
REG00001	STXBP5-AS1	STXBP5 antisense RNA 1	HGNC:44183	ENSG00000233452	.	729178	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103494	-1.702678021	knock down	down-regulator	0.025960003
REG00001	ZBED3-AS1	ZBED3 antisense RNA 1	HGNC:44188	ENSG00000250802	.	728723	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-0.752385573	knock down	down-regulator	9.42E-05
REG00001	NR2F2-AS1	NR2F2 antisense RNA 1	HGNC:44222	ENSG00000247809	.	644192	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103494	0.79600553	knock down	up-regulate	0.026212023
REG00001	LINC03033	Long intergenic non-protein coding RNA 3033	HGNC:44292	ENSG00000232774	.	400221	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-1.433878492	knock down	down-regulator	3.67E-17
REG00001	SLC25A21-AS1	SLC25A21 antisense RNA 1	HGNC:44298	ENSG00000258708	.	100129794	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	0.771743281	knock out	up-regulate	0.000113045
REG00001	ITGB2-AS1	ITGB2 antisense RNA 1	HGNC:44304	ENSG00000227039	.	100505746	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103494	0.776080886	knock down	up-regulate	0.002139037
REG00001	SDCBP2-AS1	SDCBP2 antisense RNA 1	HGNC:44314	ENSG00000234684	.	100507495	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103494	-1.550437608	knock down	down-regulator	0.003106954
REG00001	LINC00659	Long intergenic non-protein coding RNA 659	HGNC:44316	ENSG00000228705	.	100652730	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103495	1.027447305	knock down	up-regulate	0.010102614
REG00001	LINC01530	Long intergenic non-protein coding RNA 1530	HGNC:44320	ENSG00000289037	.	729975	Long non-coding RNA	Long non-coding	HEK293T	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28002401	GSE78040	0.666137904	knock down	up-regulate	0.00498473
REG00001	RAMP2-AS1	RAMP2 antisense RNA 1	HGNC:44358	ENSG00000197291	.	100190938	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-1.552681164	knock out	down-regulator	0.002233503
REG00001	MAP3K14-AS1	MAP3K14 antisense RNA 1	HGNC:44359	ENSG00000267278	.	100133991	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-1.081136669	knock out	down-regulator	0.000128037
REG00001	LINC00910	Long intergenic non-protein coding RNA 910	HGNC:44361	ENSG00000188825	.	100130581	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	1.124228984	knock down	up-regulate	4.76E-05
REG00001	FGF14-AS2	FGF14 antisense RNA 2	HGNC:44368	ENSG00000272143	.	283481	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	0.703122037	knock out	up-regulate	0.029794418
REG00001	CERS6-AS1	CERS6 antisense RNA 1	HGNC:44485	ENSG00000227617	.	100861402	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-1.108728993	knock out	down-regulator	0.049785041
REG00001	PTPRG-AS1	PTPRG antisense RNA 1	HGNC:44638	ENSG00000241472	.	100506994	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-0.828643921	knock down	down-regulator	0.002972953
REG00001	LINC00702	Long intergenic non-protein coding RNA 702	HGNC:44676	ENSG00000233117	.	100652988	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-2.019569199	knock down	down-regulator	1.57E-24
REG00001	PRKCQ-AS1	PRKCQ antisense RNA 1	HGNC:44689	ENSG00000237943	.	439949	Long non-coding RNA	Long non-coding	TPC-1	CVCL_6298	Homo sapiens	Papillary thyroid cancer	2D10: Thyroid Cancer	RNA-seq	35721711	GSE199206	-0.950733335	over expression	down-regulator	0.00236721
REG00001	VIM-AS1	VIM antisense RNA 1	HGNC:44879	ENSG00000229124	.	100507347	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-2.011713581	knock down	down-regulator	0.000206518
REG00001	PYCARD-AS1	PYCARD antisense RNA 1	HGNC:45036	ENSG00000261359	PYAS1_HUMAN	100652740	Long non-coding RNA	Long non-coding	HEK293T	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28002401	GSE78040	-0.685784298	knock down	down-regulator	0.02579824
REG00001	NPTN-IT1	NPTN intronic transcript 1	HGNC:45091	ENSG00000281183	.	101241892	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	0.703032112	knock down	up-regulate	0.030522328
REG00001	ADIRF-AS1	ADIRF antisense RNA 1	HGNC:45127	ENSG00000272734	.	100133190	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	6.752182109	knock down	up-regulate	1.46E-08
REG00001	CASC8	Cancer susceptibility 8	HGNC:45129	ENSG00000246228	.	727677	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-1.041338308	knock down	down-regulator	0.00135215
REG00001	C10orf95-AS1	C10orf95 antisense RNA 1	HGNC:45238	ENSG00000269609	.	100505761	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-2.762746321	knock down	down-regulator	1.20E-06
REG00001	H19	H19 imprinted maternally expressed transcript	HGNC:4713	ENSG00000130600	.	283120	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103494	-1.122112298	knock down	down-regulator	0.049131841
REG00001	H19	H19 imprinted maternally expressed transcript	HGNC:4713	ENSG00000130600	.	283120	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-0.703145085	knock out	down-regulator	6.98E-19
REG00001	EML2-AS1	EML2 antisense RNA 1	HGNC:48331	ENSG00000267757	.	100287177	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-0.597157445	knock out	down-regulator	0.002200959
REG00001	PITX1-AS1	PITX1 antisense RNA 1	HGNC:48332	ENSG00000224186	.	100996485	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-1.148225262	knock down	down-regulator	7.77E-06
REG00001	PITX1-AS1	PITX1 antisense RNA 1	HGNC:48332	ENSG00000224186	.	100996485	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-1.102175077	knock out	down-regulator	8.17E-06
REG00001	CTBP1-AS	CTBP1 antisense RNA	HGNC:48337	ENSG00000280927	.	285463	Long non-coding RNA	Long non-coding	HEK293	CVCL_0045	Homo sapiens	Normal	.	CLIP-seq	28977517	GSE79577	.	.	.	.
REG00001	LUCAT1	Lung cancer associated transcript 1	HGNC:48498	ENSG00000248323	.	100505994	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103494	-1.744192992	knock down	down-regulator	5.52E-07
REG00001	LUCAT1	Lung cancer associated transcript 1	HGNC:48498	ENSG00000248323	.	100505994	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-0.668135074	knock down	down-regulator	8.70E-05
REG00001	LUCAT1	Lung cancer associated transcript 1	HGNC:48498	ENSG00000248323	.	100505994	Long non-coding RNA	Long non-coding	TPC-1	CVCL_6298	Homo sapiens	Papillary thyroid cancer	2D10: Thyroid Cancer	RNA-seq	35721711	GSE199206	-1.674602497	over expression	down-regulator	0.000198235
REG00001	DUBR	DPPA2 upstream binding RNA	HGNC:48569	ENSG00000243701	.	344595	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-0.894710646	knock down	down-regulator	0.003225804
REG00001	LINC00885	Long intergenic non-protein coding RNA 885	HGNC:48571	ENSG00000224652	.	401109	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103495	-0.606234858	knock down	down-regulator	1.76E-15
REG00001	OSER1-DT	OSER1 divergent transcript	HGNC:48585	ENSG00000223891	.	100505783	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-1.780891788	knock down	down-regulator	0.0013732
REG00001	RAD51-AS1	RAD51 antisense RNA 1	HGNC:48621	ENSG00000245849	.	100505648	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-0.621617648	knock down	down-regulator	0.007334416
REG00001	NR2F1-AS1	NR2F1 antisense RNA 1	HGNC:48622	ENSG00000237187	.	441094	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	0.733778022	knock down	up-regulate	0.049567233
REG00001	CHASERR	CHD2 adjacent suppressive regulatory RNA	HGNC:48626	ENSG00000272888	.	100507217	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	0.607515307	knock down	up-regulate	0.00517588
REG00001	LINC00937	Long intergenic non-protein coding RNA 937	HGNC:48629	ENSG00000226091	.	389634	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103494	-0.808533904	knock down	down-regulator	0.004280934
REG00001	LINC00944	Long intergenic non-protein coding RNA 944	HGNC:48640	ENSG00000256128	.	387895	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	0.915593008	knock down	up-regulate	0.000140088
REG00001	LINC00945	Long intergenic non-protein coding RNA 945	HGNC:48643	ENSG00000232539	.	101930746	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103494	-1.322192523	knock down	down-regulator	6.19E-06
REG00001	PRDM16-DT	PRDM16 divergent transcript	HGNC:48664	ENSG00000177133	.	440556	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-0.8309	knock down	down-regulator	4.36E-08
REG00001	NCAM1-AS1	NCAM1 antisense RNA1	HGNC:48675	ENSG00000227487	.	100288346	Long non-coding RNA	Long non-coding	TPC-1	CVCL_6298	Homo sapiens	Papillary thyroid cancer	2D10: Thyroid Cancer	RNA-seq	35721711	GSE199206	1.204956708	over expression	up-regulate	0.000226018
REG00001	PPP1R26-AS1	PPP1R26 antisense RNA 1	HGNC:48717	ENSG00000225361	.	100506599	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103494	0.6577	knock down	up-regulate	8.33E-06
REG00001	MAMDC2-AS1	MAMDC2 antisense RNA 1	HGNC:48719	ENSG00000204706	.	100507244	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	0.668860642	knock out	up-regulate	0.000743795
REG00001	MSC-AS1	MSC antisense RNA 1	HGNC:48724	ENSG00000235531	.	100132891	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103494	0.816283669	knock down	up-regulate	0.001491079
REG00001	MSC-AS1	MSC antisense RNA 1	HGNC:48724	ENSG00000235531	.	100132891	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	1.080845124	knock down	up-regulate	0.001087132
REG00001	LINC00968	Long intergenic non-protein coding RNA 968	HGNC:48727	ENSG00000246430	.	100507632	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103494	-0.607354291	knock down	down-regulator	1.20E-05
REG00001	GATA6-AS1	GATA6 antisense RNA 1 (head to head)	HGNC:48840	ENSG00000266010	.	100128893	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	0.716845706	knock down	up-regulate	8.46E-10
REG00001	LINC00973	Long intergenic non-protein coding RNA 973	HGNC:48868	ENSG00000240476	.	100506377	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	0.695751763	knock down	up-regulate	0.002290444
REG00001	VPS9D1-AS1	VPS9D1 antisense RNA 1	HGNC:48915	ENSG00000261373	.	100128881	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-1.26136125	knock down	down-regulator	4.95E-10
REG00001	MNX1-AS1	MNX1 antisense RNA 1 (head to head)	HGNC:48954	ENSG00000243479	.	645249	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-0.978964556	knock down	down-regulator	0.011788788
REG00001	MNX1-AS1	MNX1 antisense RNA 1 (head to head)	HGNC:48954	ENSG00000243479	.	645249	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	1.937917934	knock out	up-regulate	0.000783488
REG00001	KDM7A-DT	KDM7A divergent transcript	HGNC:48959	ENSG00000260231	.	100134229	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	1.090676696	knock down	up-regulate	4.06E-29
REG00001	RNF32-DT	RNF32 divergent transcript	HGNC:48971	ENSG00000182648	R32DT_HUMAN	100506380	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-1.213382122	knock down	down-regulator	0.012657399
REG00001	PCAT14	Prostate cancer associated transcript 14	HGNC:48977	ENSG00000280623	.	101978785	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103495	-0.711276378	knock down	down-regulator	0.002299515
REG00001	GMDS-DT	GMDS divergent transcript	HGNC:48993	ENSG00000250903	.	100508120	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	0.824972354	knock out	up-regulate	0.000298471
REG00001	PURPL	P53 upregulated regulator of p53 levels	HGNC:48995	ENSG00000250337	.	643401	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-1.143088266	knock down	down-regulator	0.036007118
REG00001	SALRNA2	Senescence associated long non-coding RNA 2	HGNC:49003	ENSG00000280515	.	104548973	Long non-coding RNA	Long non-coding	TPC-1	CVCL_6298	Homo sapiens	Papillary thyroid cancer	2D10: Thyroid Cancer	RNA-seq	35721711	GSE199206	0.926589633	over expression	up-regulate	0.008225627
REG00001	LINC01023	Long intergenic non-protein coding RNA 1023	HGNC:49004	ENSG00000272523	.	100652853	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	0.885526237	knock down	up-regulate	0.013429486
REG00001	NNT-AS1	NNT antisense RNA 1	HGNC:49005	ENSG00000248092	.	100652772	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	0.835714812	knock down	up-regulate	0.008705766
REG00001	NNT-AS1	NNT antisense RNA 1	HGNC:49005	ENSG00000248092	.	100652772	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	0.648329608	knock out	up-regulate	0.002675944
REG00001	SNHG18	Small nucleolar RNA host gene 18	HGNC:49007	ENSG00000250786	.	100505806	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-0.777986935	knock down	down-regulator	0.00245859
REG00001	LINC01033	Long intergenic non-protein coding RNA 1033	HGNC:49019	ENSG00000249069	.	104355136	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	0.593679296	knock out	up-regulate	0.04397458
REG00001	TMCC1-DT	TMCC1 divergent transcript	HGNC:49060	ENSG00000271270	.	100507032	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-1.399471922	knock out	down-regulator	0.001055267
REG00001	LINC01088	Long intergenic non-protein coding RNA 1088	HGNC:49148	ENSG00000249307	.	100505875	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103494	1.383273197	knock down	up-regulate	0.030447641
REG00001	OR2A1-AS1	OR2A1 antisense RNA 1	HGNC:49168	ENSG00000244479	.	101928492	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-0.736017436	knock out	down-regulator	0.00262461
REG00001	PCAT18	Prostate cancer associated transcript 18	HGNC:49211	ENSG00000265369	.	728606	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103494	-0.963777526	knock down	down-regulator	0.009560932
REG00001	LINC01094	Long intergenic non-protein coding RNA 1094	HGNC:49219	ENSG00000251442	.	100505702	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103494	-0.982250855	knock down	down-regulator	0.013408198
REG00001	LINC01094	Long intergenic non-protein coding RNA 1094	HGNC:49219	ENSG00000251442	.	100505702	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-1.151702885	knock down	down-regulator	0.001074033
REG00001	EMC3-AS1	EMC3 antisense RNA 1	HGNC:49223	ENSG00000180385	.	442075	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103494	-1.898794875	knock down	down-regulator	7.97E-07
REG00001	LINC01116	Long intergenic non-protein coding RNA 1116	HGNC:49259	ENSG00000163364	.	375295	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-0.610499986	knock down	down-regulator	0.025074804
REG00001	LINC01119	Long intergenic non-protein coding RNA 1119	HGNC:49262	ENSG00000239332	.	100134259	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	0.725099412	knock down	up-regulate	0.01184301
REG00001	LINC01119	Long intergenic non-protein coding RNA 1119	HGNC:49262	ENSG00000239332	.	100134259	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	0.677912366	knock out	up-regulate	0.043308154
REG00001	LINC01123	Long intergenic non-protein coding RNA 1123	HGNC:49269	ENSG00000204588	.	440894	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-1.511538157	knock down	down-regulator	0.000860408
REG00001	LINC01124	Long intergenic non-protein coding RNA 1124	HGNC:49270	ENSG00000222033	.	440925	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	1.296121412	knock down	up-regulate	0.025818442
REG00001	PAX8-AS1	PAX8 antisense RNA 1	HGNC:49271	ENSG00000189223	.	654433	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103494	0.587421378	knock down	up-regulate	0.002009857
REG00001	PAX8-AS1	PAX8 antisense RNA 1	HGNC:49271	ENSG00000189223	.	654433	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	0.946787405	knock down	up-regulate	0.000431928
REG00001	LINC01127	Long intergenic non-protein coding RNA 1127	HGNC:49292	ENSG00000281162	.	100506328	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103494	-0.952438788	knock down	down-regulator	0.000822137
REG00001	LINC01133	Long intergenic non-protein coding RNA 1133	HGNC:49447	ENSG00000224259	.	100505633	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103494	1.017582135	knock down	up-regulate	0.018757277
REG00001	LINC01133	Long intergenic non-protein coding RNA 1133	HGNC:49447	ENSG00000224259	.	100505633	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-0.74267328	knock down	down-regulator	0.000689526
REG00001	LINC01134	Long intergenic non-protein coding RNA 1134	HGNC:49449	ENSG00000236423	.	100133612	Long non-coding RNA	Long non-coding	TPC-1	CVCL_6298	Homo sapiens	Papillary thyroid cancer	2D10: Thyroid Cancer	RNA-seq	35721711	GSE199206	-0.909231039	over expression	down-regulator	0.013435179
REG00001	THRIL	TNF and HNRNPL related immunoregulatory long non-coding RNA	HGNC:49503	ENSG00000280634	.	102659353	Long non-coding RNA	Long non-coding	HEK293	CVCL_0045	Homo sapiens	Normal	.	CLIP-seq	28977517	GSE79577	.	.	.	.
REG00001	PANTR1	POU3F3 adjacent non-coding transcript 1	HGNC:49513	ENSG00000233639	.	100506421	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	0.9293	knock out	up-regulate	0.0009256
REG00001	LINC01173	Long intergenic non-protein coding RNA 1173	HGNC:49545	ENSG00000280744	.	106144537	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	1.538745383	knock down	up-regulate	0.008650298
REG00001	MIR222HG	MiR222/221 cluster host gene	HGNC:49555	ENSG00000270069	.	104457406	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-0.82766713	knock out	down-regulator	0.015096866
REG00001	SNHG19	Small nucleolar RNA host gene 19	HGNC:49574	ENSG00000260260	.	100507303	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103494	-1.100385088	knock down	down-regulator	0.004920231
REG00001	SNHG19	Small nucleolar RNA host gene 19	HGNC:49574	ENSG00000260260	.	100507303	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-0.733675677	knock down	down-regulator	0.012021946
REG00001	LETR1	Lymphatic endothelial transcriptional regulator lncRNA 1	HGNC:49597	ENSG00000248441	.	400456	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	0.949365323	knock out	up-regulate	6.46E-06
REG00001	VLDLR-AS1	VLDLR antisense RNA 1	HGNC:49621	ENSG00000236404	.	401491	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103494	0.981990503	knock down	up-regulate	1.08E-07
REG00001	FIRRE	Firre intergenic repeating RNA element	HGNC:49627	ENSG00000213468	.	286467	Long non-coding RNA	Long non-coding	HEK293	CVCL_0045	Homo sapiens	Normal	.	CLIP-seq	28977517	GSE79577	.	.	.	.
REG00001	LINC01215	Long intergenic non-protein coding RNA 1215	HGNC:49651	ENSG00000271856	.	101929623	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103494	-0.672004048	knock down	down-regulator	0.022531955
REG00001	ABALON	Apoptotic BCL2L1-antisense long non-coding RNA	HGNC:49667	ENSG00000281376	.	103021294	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-0.78983314	knock down	down-regulator	0.002429235
REG00001	LINC01234	Long intergenic non-protein coding RNA 1234	HGNC:49757	ENSG00000249550	.	100506465	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-2.557645738	knock down	down-regulator	0.036840253
REG00001	SNHG21	Small nucleolar RNA host gene 21	HGNC:50284	ENSG00000250988	.	100505616	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103494	-0.89847925	knock down	down-regulator	0.008720513
REG00001	SNHG22	Small nucleolar RNA host gene 22	HGNC:50285	ENSG00000267322	.	103091864	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-0.646756413	knock down	down-regulator	0.004083186
REG00001	PELATON	Plaque enriched lncRNA in atherosclerotic and inflammatory bowel macrophage regulation	HGNC:50328	ENSG00000224397	.	100506115	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-0.939843154	knock down	down-regulator	1.69E-06
REG00001	TBX2-AS1	TBX2 antisense RNA 1	HGNC:50355	ENSG00000267280	.	103689912	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-0.875849469	knock down	down-regulator	0.027089546
REG00001	LINC01301	Long intergenic non-protein coding RNA 1301	HGNC:50464	ENSG00000251396	.	100505532	Long non-coding RNA	Long non-coding	TPC-1	CVCL_6298	Homo sapiens	Papillary thyroid cancer	2D10: Thyroid Cancer	RNA-seq	35721711	GSE199206	-2.785924352	over expression	down-regulator	0.000131548
REG00001	NUP50-DT	NUP50 divergent transcript	HGNC:50502	ENSG00000226328	.	100506714	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-0.784304399	knock out	down-regulator	0.006370906
REG00001	ZNF213-AS1	ZNF213 antisense RNA 1 (head to head)	HGNC:50505	ENSG00000263072	.	100507458	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-2.527278816	knock out	down-regulator	0.000133747
REG00001	EPHA5-AS1	EPHA5 antisense RNA 1	HGNC:50602	ENSG00000250846	.	100144602	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	2.101352434	knock out	up-regulate	0.044411975
REG00001	TGFB2-AS1	TGFB2 antisense RNA 1 (head to head)	HGNC:50628	ENSG00000232480	.	728463	Long non-coding RNA	Long non-coding	HEK293	CVCL_0045	Homo sapiens	Normal	.	CLIP-seq	28977517	GSE79577	.	.	.	.
REG00001	LINC01410	Long intergenic non-protein coding RNA 1410	HGNC:50702	ENSG00000238113	.	103352539	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-1.645116612	knock down	down-regulator	8.23E-05
REG00001	LINC01426	Long intergenic non-protein coding RNA 1426	HGNC:50734	ENSG00000234380	.	100506385	Long non-coding RNA	Long non-coding	TPC-1	CVCL_6298	Homo sapiens	Papillary thyroid cancer	2D10: Thyroid Cancer	RNA-seq	35721711	GSE199206	-0.995648665	over expression	down-regulator	0.028883178
REG00001	TRPM2-AS	TRPM2 antisense RNA	HGNC:50758	ENSG00000230061	.	101928607	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-2.221340984	knock down	down-regulator	0.00126425
REG00001	LINC01444	Long intergenic non-protein coding RNA 1444	HGNC:50769	ENSG00000264301	.	101927642	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-1.347075896	knock down	down-regulator	0.001291281
REG00001	LINC01467	Long intergenic non-protein coding RNA 1467	HGNC:50911	ENSG00000258977	.	101928559	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	1.241847038	knock out	up-regulate	0.029627464
REG00001	LINC01474	Long intergenic non-protein coding RNA 1474	HGNC:51111	ENSG00000236849	.	101927258	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103494	0.78120315	knock down	up-regulate	0.002569852
REG00001	SLC14A2-AS1	SLC14A2 antisense RNA 1	HGNC:51125	ENSG00000267097	.	101927980	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	0.629248912	knock out	up-regulate	0.013968121
REG00001	MRGPRF-AS1	MRGPRF antisense RNA 1	HGNC:51140	ENSG00000256508	.	101928200	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103494	-1.544187226	knock down	down-regulator	0.015422382
REG00001	STPG3-AS1	STPG3 antisense RNA 1	HGNC:51176	ENSG00000275549	.	100129722	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-0.82221364	knock down	down-regulator	0.038429695
REG00001	ZNF30-AS1	ZNF30 antisense RNA 1	HGNC:51179	ENSG00000270876	.	102723513	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-2.354711257	knock out	down-regulator	0.002286553
REG00001	LINC01503	Long intergenic non-protein coding RNA 1503	HGNC:51184	ENSG00000233901	.	100506119	Long non-coding RNA	Long non-coding	HEK293	CVCL_0045	Homo sapiens	Normal	.	CLIP-seq	28977517	GSE79577	.	.	.	.
REG00001	LINC01506	Long intergenic non-protein coding RNA 1506	HGNC:51187	ENSG00000234506	.	101927015	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103494	0.803804728	knock down	up-regulate	0.01201885
REG00001	NALT1	NOTCH1 associated lncRNA in T cell acute lymphoblastic leukemia 1	HGNC:51192	ENSG00000237886	.	101928483	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	0.949699287	knock down	up-regulate	0.020501729
REG00001	MAFA-AS1	MAFA antisense RNA 1	HGNC:51203	ENSG00000254338	.	104326051	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-0.633129086	knock down	down-regulator	0.039789266
REG00001	LINC01516	Long intergenic non-protein coding RNA 1516	HGNC:51211	ENSG00000231422	.	101929025	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-0.866461957	knock down	down-regulator	0.016110994
REG00001	SVIL-AS1	SVIL antisense RNA 1	HGNC:51219	ENSG00000224597	.	102724316	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	0.922419682	knock down	up-regulate	0.000519725
REG00001	DLGAP4-AS1	DLGAP4 antisense RNA 1	HGNC:51223	ENSG00000232907	.	101926987	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103494	0.653789947	knock down	up-regulate	0.001738452
REG00001	NRIR	Negative regulator of interferon response	HGNC:51269	ENSG00000225964	.	104326052	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103494	0.838993538	knock down	up-regulate	0.000373561
REG00001	MZF1-AS1	MZF1 antisense RNA 1	HGNC:51271	ENSG00000267858	.	100131691	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-0.942065632	knock out	down-regulator	0.035675985
REG00001	TMEM147-AS1	TMEM147 antisense RNA 1	HGNC:51273	ENSG00000236144	.	100506469	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103494	1.618716669	knock down	up-regulate	0.003870367
REG00001	BISPR	BST2 interferon stimulated positive regulator	HGNC:51290	ENSG00000282851	.	105221694	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103494	-0.748450292	knock down	down-regulator	2.41E-05
REG00001	ZNF528-AS1	ZNF528 antisense RNA 1	HGNC:51305	ENSG00000269834	.	102724105	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-1.494443495	knock out	down-regulator	0.021932315
REG00001	GAPLINC	Gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA	HGNC:51308	ENSG00000266835	.	100505592	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103494	4.192754534	knock down	up-regulate	0.000695505
REG00001	GAPLINC	Gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA	HGNC:51308	ENSG00000266835	.	100505592	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-0.928270814	knock down	down-regulator	1.57E-05
REG00001	PIK3CD-AS2	PIK3CD antisense RNA 2	HGNC:51334	ENSG00000231789	.	101929074	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	0.78538446	knock down	up-regulate	0.000176544
REG00001	SP2-AS1	SP2 antisense RNA 1	HGNC:51341	ENSG00000234494	.	100506325	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-1.000167276	knock out	down-regulator	0.001816564
REG00001	NSMCE1-DT	NSMCE1 divergent transcript	HGNC:51368	ENSG00000245888	.	400512	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-0.6036395	knock down	down-regulator	0.01882426
REG00001	NSMCE1-DT	NSMCE1 divergent transcript	HGNC:51368	ENSG00000245888	.	400512	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	0.748560763	knock out	up-regulate	0.001381316
REG00001	ATP2A1-AS1	ATP2A1 antisense RNA 1	HGNC:51370	ENSG00000260442	.	100289092	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	0.791615624	knock out	up-regulate	0.008007333
REG00001	MMP25-AS1	MMP25 antisense RNA 1	HGNC:51372	ENSG00000261971	.	100507419	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	1.137388915	knock down	up-regulate	0.008103275
REG00001	MMP25-AS1	MMP25 antisense RNA 1	HGNC:51372	ENSG00000261971	.	100507419	Long non-coding RNA	Long non-coding	TPC-1	CVCL_6298	Homo sapiens	Papillary thyroid cancer	2D10: Thyroid Cancer	RNA-seq	35721711	GSE199206	-0.780262645	over expression	down-regulator	0.007270407
REG00001	LINC01569	Long intergenic non-protein coding RNA 1569	HGNC:51380	ENSG00000262468	.	100507501	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-2.910866314	knock down	down-regulator	0.018859385
REG00001	LINC01569	Long intergenic non-protein coding RNA 1569	HGNC:51380	ENSG00000262468	.	100507501	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	2.474154603	knock out	up-regulate	0.022106377
REG00001	MIR762HG	MIR762 host gene	HGNC:51386	ENSG00000260083	.	101928736	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	0.923378563	knock out	up-regulate	0.013405489
REG00001	KCNMB2-AS1	KCNMB2 antisense RNA 1	HGNC:51409	ENSG00000237978	.	104797538	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-0.954199594	knock out	down-regulator	7.00E-06
REG00001	VPS33B-DT	VPS33B divergent transcript	HGNC:51413	ENSG00000214432	.	101926911	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-1.098732336	knock down	down-regulator	7.56E-07
REG00001	VPS33B-DT	VPS33B divergent transcript	HGNC:51413	ENSG00000214432	.	101926911	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	4.607538773	knock out	up-regulate	0.000343892
REG00001	CRTC3-AS1	CRTC3 antisense RNA 1	HGNC:51433	ENSG00000259736	.	101926895	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	0.663597457	knock out	up-regulate	0.003906959
REG00001	FRG1-DT	FRG1 divergent transcript	HGNC:51590	ENSG00000245685	.	728339	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	1.794284021	knock out	up-regulate	0.040920391
REG00001	LINC01605	Long intergenic non-protein coding RNA 1605	HGNC:51654	ENSG00000253161	.	100507420	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-2.814401917	knock down	down-regulator	0.033826574
REG00001	LINC01605	Long intergenic non-protein coding RNA 1605	HGNC:51654	ENSG00000253161	.	100507420	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-1.706676614	knock out	down-regulator	4.24E-05
REG00001	MYOSLID	Myocardin-induced smooth muscle lncRNA, inducer of differentiation	HGNC:51821	ENSG00000229647	.	105373853	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	0.685150567	knock down	up-regulate	0.031288267
REG00001	ATXN2-AS	ATXN2 antisense RNA	HGNC:51838	ENSG00000258099	.	102723619	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	3.714856946	knock down	up-regulate	8.01E-160
REG00001	MIR193BHG	MIR193b-365a host gene	HGNC:51945	ENSG00000262454	.	100129781	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103495	-1.204907039	knock down	down-regulator	0.002819044
REG00001	MIR193BHG	MIR193b-365a host gene	HGNC:51945	ENSG00000262454	.	100129781	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-0.58986588	knock down	down-regulator	0.006019514
REG00001	MIR194-2HG	MIR194-2 host gene	HGNC:51946	ENSG00000229719	.	105369343	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-0.868463612	knock down	down-regulator	0.008126276
REG00001	MIR3681HG	MIR3681 host gene	HGNC:52001	ENSG00000224184	.	100506457	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103494	-1.139519182	knock down	down-regulator	0.011690018
REG00001	MIR3945HG	MIR3945 host gene	HGNC:52002	ENSG00000251230	.	731424	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103494	-0.606525849	knock down	down-regulator	0.017281886
REG00001	MIR548XHG	MIR548X host gene	HGNC:52006	ENSG00000224141	.	101927797	Long non-coding RNA	Long non-coding	NB4	CVCL_0005	Homo sapiens	Acute myeloid leukemia	2A60: Acute myeloid leukaemia	RNA-seq	30991027	GSE103494	0.730929178	knock down	up-regulate	0.002966144
REG00001	LINC01623	Long intergenic non-protein coding RNA 1623	HGNC:52050	ENSG00000225595	.	401242	Long non-coding RNA	Long non-coding	HEK293	CVCL_0045	Homo sapiens	Normal	.	CLIP-seq	28977517	GSE79577	.	.	.	.
REG00001	CCDC18-AS1	CCDC18 antisense RNA 1	HGNC:52262	ENSG00000223745	.	100131564	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-4.213153842	knock down	down-regulator	6.13E-05
REG00001	CCDC18-AS1	CCDC18 antisense RNA 1	HGNC:52262	ENSG00000223745	.	100131564	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	1.08556739	knock out	up-regulate	0.013872791
REG00001	LINC01647	Long intergenic non-protein coding RNA 1647	HGNC:52434	ENSG00000235643	.	101929181	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-0.604190461	knock out	down-regulator	0.036618281
REG00001	LINC01694	Long intergenic non-protein coding RNA 1694	HGNC:52481	ENSG00000233922	.	105372840	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	0.616213923	knock out	up-regulate	0.003388994
REG00001	LINC01703	Long intergenic non-protein coding RNA 1703	HGNC:52491	ENSG00000225518	.	105373113	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-0.820149626	knock out	down-regulator	0.00151516
REG00001	IGFL2-AS1	IGFL2 antisense RNA 1	HGNC:52559	ENSG00000268621	.	645553	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-3.173248718	knock down	down-regulator	0.008817994
REG00001	LINC01778	Long intergenic non-protein coding RNA 1778	HGNC:52568	ENSG00000223382	.	105378622	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-1.269553957	knock out	down-regulator	0.003448257
REG00001	LINC01843	Long intergenic non-protein coding RNA 1843	HGNC:52659	ENSG00000251169	.	101927934	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	0.897011493	knock down	up-regulate	0.010423055
REG00001	LINC01915	Long intergenic non-protein coding RNA 1915	HGNC:52734	ENSG00000265485	.	729950	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-0.815334565	knock out	down-regulator	0.04456811
REG00001	LINC01941	Long intergenic non-protein coding RNA 1941	HGNC:52764	ENSG00000226813	.	105373600	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-0.665472739	knock out	down-regulator	0.026960939
REG00001	LINC01950	Long intergenic non-protein coding RNA 1950	HGNC:52773	ENSG00000251027	.	102467213	Long non-coding RNA	Long non-coding	HEK293	CVCL_0045	Homo sapiens	Normal	.	CLIP-seq	28977517	GSE79577	.	.	.	.
REG00001	H2AZ2-DT	H2AZ2 divergent transcript	HGNC:52775	ENSG00000234183	.	105375261	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-1.106653419	knock down	down-regulator	1.89E-40
REG00001	LINC01962	Long intergenic non-protein coding RNA 1962	HGNC:52787	ENSG00000248473	.	102577426	Long non-coding RNA	Long non-coding	HEK293	CVCL_0045	Homo sapiens	Normal	.	CLIP-seq	28977517	GSE79577	.	.	.	.
REG00001	LINC02015	Long intergenic non-protein coding RNA 2015	HGNC:52850	ENSG00000231574	.	102724550	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-1.335680717	knock down	down-regulator	0.012643591
REG00001	LINC02019	Long intergenic non-protein coding RNA 2019	HGNC:52854	ENSG00000273356	.	107986085	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	0.606442489	knock out	up-regulate	0.018046642
REG00001	LINC02043	Long intergenic non-protein coding RNA 2043	HGNC:52883	ENSG00000232233	.	102724699	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-1.172116979	knock down	down-regulator	0.009891571
REG00001	LINC02043	Long intergenic non-protein coding RNA 2043	HGNC:52883	ENSG00000232233	.	102724699	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-1.829766504	knock out	down-regulator	5.48E-05
REG00001	LINC02154	Long intergenic non-protein coding RNA 2154	HGNC:53015	ENSG00000235385	.	109729169	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-1.426523662	knock down	down-regulator	0.029046021
REG00001	LINC02154	Long intergenic non-protein coding RNA 2154	HGNC:53015	ENSG00000235385	.	109729169	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-2.59816357	knock out	down-regulator	5.93E-05
REG00001	CCDC13-AS2	CCDC13 antisense RNA 2	HGNC:53019	ENSG00000225611	.	729083	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-2.689631539	knock out	down-regulator	0.000127278
REG00001	NIHCOLE	NcRNA involved in NHEJ oncogenic ligation efficiency	HGNC:53024	ENSG00000251026	.	107986389	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-0.719285248	knock out	down-regulator	0.000191569
REG00001	CD2BP2-DT	CD2BP2 divergent transcript	HGNC:53029	ENSG00000260219	.	101928707	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-1.93687745	knock out	down-regulator	0.011419066
REG00001	ARLNC1	Androgen receptor regulated long noncoding RNA 1	HGNC:53032	ENSG00000260896	.	100996425	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	2.637962206	knock out	up-regulate	0.00757235
REG00001	LINC02226	Long intergenic non-protein coding RNA 2226	HGNC:53095	ENSG00000245729	.	729506	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-1.408931747	knock out	down-regulator	0.013838244
REG00001	FHIP1A-DT	FHIP1A divergent transcript	HGNC:53123	ENSG00000251611	.	105377486	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	1.159452189	knock out	up-regulate	0.015680091
REG00001	ZNF710-AS1	ZNF710 antisense RNA 1	HGNC:53141	ENSG00000259291	.	109729181	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-2.723629279	knock down	down-regulator	9.70E-05
REG00001	LINC02253	Long intergenic non-protein coding RNA 2253	HGNC:53151	ENSG00000259485	.	107984764	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	0.990710473	knock down	up-regulate	0.006094578
REG00001	LINC02253	Long intergenic non-protein coding RNA 2253	HGNC:53151	ENSG00000259485	.	107984764	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-2.879024731	knock out	down-regulator	0.0019323
REG00001	SPINT1-AS1	SPINT1 antisense RNA 1	HGNC:53162	ENSG00000261183	.	102724362	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-0.870872858	knock down	down-regulator	0.005961746
REG00001	LINC02292	Long intergenic non-protein coding RNA 2292	HGNC:53208	ENSG00000258630	.	101929080	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-1.263937124	knock out	down-regulator	0.007212002
REG00001	LINC02298	Long intergenic non-protein coding RNA 2298	HGNC:53216	ENSG00000257556	.	102723354	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	1.727489867	knock down	up-regulate	0.000741536
REG00001	LINC02352	Long intergenic non-protein coding RNA 2352	HGNC:53274	ENSG00000259448	.	102725022	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	0.753685998	knock out	up-regulate	0.039419388
REG00001	LINC02356	Long intergenic non-protein coding RNA 2356	HGNC:53278	ENSG00000257595	.	105369984	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	0.61615649	knock down	up-regulate	0.011269101
REG00001	LINC02365	Long intergenic non-protein coding RNA 2365	HGNC:53285	ENSG00000254233	.	105377586	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	0.642308527	knock down	up-regulate	0.048168579
REG00001	KDM2B-DT	KDM2B divergent transcript	HGNC:53287	ENSG00000256742	.	101928346	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	0.601499386	knock out	up-regulate	0.000427767
REG00001	LINC02367	Long intergenic non-protein coding RNA 2367	HGNC:53290	ENSG00000260423	.	101930452	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-0.905008903	knock out	down-regulator	0.030165813
REG00001	LINC02384	Long intergenic non-protein coding RNA 2384	HGNC:53308	ENSG00000251301	.	100507195	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-1.469322992	knock out	down-regulator	0.018619847
REG00001	LINC02389	Long intergenic non-protein coding RNA 2389	HGNC:53316	ENSG00000255693	.	400046	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-1.61670719	knock out	down-regulator	0.044086819
REG00001	LINC02447	Long intergenic non-protein coding RNA 2447	HGNC:53379	ENSG00000245468	.	730971	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-0.742230369	knock down	down-regulator	0.004029453
REG00001	LINC02454	Long intergenic non-protein coding RNA 2454	HGNC:53387	ENSG00000256268	.	105369807	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-0.726705254	knock down	down-regulator	0.033269889
REG00001	LINC02466	Long intergenic non-protein coding RNA 2466	HGNC:53405	ENSG00000246876	.	101927282	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	0.906636938	knock out	up-regulate	0.042563927
REG00001	MRPS30-DT	MRPS30 divergent transcript	HGNC:53420	ENSG00000251141	.	100506674	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-0.842123828	knock out	down-regulator	0.037731601
REG00001	LINC02506	Long intergenic non-protein coding RNA 2506	HGNC:53495	ENSG00000251129	.	102723828	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-2.0739811	knock out	down-regulator	0.000120169
REG00001	PINCR	P53-induced noncoding RNA	HGNC:53590	ENSG00000224294	.	101927501	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-1.148260988	knock down	down-regulator	0.014213213
REG00001	ITGB1-DT	ITGB1 divergent transcript	HGNC:53718	ENSG00000229656	.	101929475	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	2.887319284	knock down	up-regulate	2.38E-07
REG00001	ZNF426-DT	ZNF426 divergent transcript	HGNC:53777	ENSG00000278611	.	101928238	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-1.289055921	knock down	down-regulator	0.039948899
REG00001	THORLNC	Testis associated oncogenic lncRNA	HGNC:53788	ENSG00000226856	.	100506797	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	0.640694635	knock down	up-regulate	0.018743241
REG00001	LINC02582	Long intergenic non-protein coding RNA 2582	HGNC:53792	ENSG00000261780	.	100505817	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	1.093606383	knock down	up-regulate	0.040822297
REG00001	CEROX1	Cytoplasmic endogenous regulator of oxidative phosphorylation 1	HGNC:53928	ENSG00000260807	.	115804232	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	0.747284614	knock down	up-regulate	0.041957312
REG00001	CEROX1	Cytoplasmic endogenous regulator of oxidative phosphorylation 1	HGNC:53928	ENSG00000260807	.	115804232	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	0.747284614	knock out	up-regulate	0.041957312
REG00001	LINC02593	Long intergenic non-protein coding RNA 2593	HGNC:53933	ENSG00000223764	.	100130417	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-1.64753152	knock down	down-regulator	0.026224664
REG00001	LNCOC1	LncRNA associated with ovarian cancer 1	HGNC:53947	ENSG00000253741	.	100288181	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-3.307925541	knock out	down-regulator	0.007188427
REG00001	LINC02604	Long intergenic non-protein coding RNA 2604	HGNC:53972	ENSG00000273142	.	644794	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-0.72788523	knock down	down-regulator	0.033563753
REG00001	ZNF687-AS1	ZNF687 antisense RNA 1	HGNC:54048	ENSG00000232671	.	100507670	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-2.119219394	knock out	down-regulator	0.007130678
REG00001	LYPLAL1-AS1	LYPLAL1 antisense RNA 1	HGNC:54054	ENSG00000228536	.	102723886	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-0.734094987	knock down	down-regulator	0.000393232
REG00001	SNTG2-AS1	SNTG2 antisense RNA 1	HGNC:54058	ENSG00000235688	.	101060391	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-0.89610148	knock out	down-regulator	0.008628843
REG00001	CHROMR	Cholesterol induced regulator of metabolism RNA	HGNC:54059	ENSG00000223960	.	101927027	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	0.774344545	knock down	up-regulate	0.000281052
REG00001	HECW2-AS1	HECW2 antisense RNA 1	HGNC:54062	ENSG00000229056	.	101927482	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-1.451704235	knock down	down-regulator	4.94E-60
REG00001	LINC02614	Long intergenic non-protein coding RNA 2614	HGNC:54072	ENSG00000241288	.	101927056	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-0.763412227	knock out	down-regulator	0.011055112
REG00001	ANK3-DT	ANK3 divergent transcript	HGNC:54102	ENSG00000254271	.	105378320	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-1.606833787	knock out	down-regulator	6.24E-08
REG00001	EDRF1-DT	EDRF1 divergent transcript	HGNC:54128	ENSG00000224023	.	399821	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	0.689366507	knock out	up-regulate	0.01596896
REG00001	LASTR	LncRNA associated with SART3 regulation of splicing	HGNC:54143	ENSG00000242147	.	105376382	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	1.167796061	knock down	up-regulate	0.012056204
REG00001	LINC02697	Long intergenic non-protein coding RNA 2697	HGNC:54211	ENSG00000255327	.	105369586	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-2.63217339	knock down	down-regulator	1.30E-89
REG00001	LINC02709	Long intergenic non-protein coding RNA 2709	HGNC:54226	ENSG00000245522	.	440028	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-0.86042331	knock out	down-regulator	0.010725092
REG00001	LINC02714	Long intergenic non-protein coding RNA 2714	HGNC:54231	ENSG00000251226	.	729305	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	1.226203312	knock down	up-regulate	3.18E-11
REG00001	HIF1A-AS3	HIF1A antisense RNA 3	HGNC:54284	ENSG00000258667	.	105370526	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-3.739088137	knock out	down-regulator	0.010733074
REG00001	LINC02772	Long intergenic non-protein coding RNA 2772	HGNC:54292	ENSG00000271736	.	105371455	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-0.811239526	knock out	down-regulator	0.002246496
REG00001	LINC02804	Long intergenic non-protein coding RNA 2804	HGNC:54338	ENSG00000274372	.	105371228	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-0.779052672	knock down	down-regulator	9.60E-06
REG00001	LINC03034	Long intergenic non-protein coding RNA 3034	HGNC:54360	ENSG00000259772	.	283710	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-0.945199506	knock down	down-regulator	5.60E-23
REG00001	TIAM1-AS1	TIAM1 antisense RNA 1	HGNC:54361	ENSG00000237594	.	150051	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	1.11707408	knock down	up-regulate	0.000667509
REG00001	LOC100128386	ARHGAP42 antisense RNA 1	HGNC:54801	ENSG00000248027	.	100128386	Long non-coding RNA	Long non-coding	HEK293	CVCL_0045	Homo sapiens	Normal	.	CLIP-seq	28977517	GSE79577	.	.	.	.
REG00001	MYG1-AS1	MYG1 antisense RNA 1	HGNC:54810	ENSG00000257605	.	112268097	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-0.877958135	knock out	down-regulator	0.007357341
REG00001	SETBP1-DT	SETBP1 divergent transcript	HGNC:54819	ENSG00000267414	.	101927943	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	0.997495417	knock out	up-regulate	0.000730513
REG00001	UICLM	Up-regulated in colorectal cancer liver metastasis	HGNC:54869	ENSG00000233392	.	200772	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	1.867066795	knock down	up-regulate	0.000100789
REG00001	IRF2-DT	IRF2 divergent transcript	HGNC:54871	ENSG00000271646	.	117134601	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-0.638820348	knock down	down-regulator	0.000131401
REG00001	WDR5-DT	WDR5 divergent transcript	HGNC:55141	ENSG00000273249	.	118568806	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	4.332967569	knock out	up-regulate	1.48E-29
REG00001	INSIG1-DT	INSIG1 divergent transcript	HGNC:55155	ENSG00000273117	.	105375591	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-0.899836925	knock down	down-regulator	7.60E-05
REG00001	MIOS-DT	MIOS divergent transcript	HGNC:55187	ENSG00000272894	.	101927391	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	0.98184803	knock out	up-regulate	1.04E-06
REG00001	HK2-DT	HK2 divergent transcript	HGNC:55204	ENSG00000272711	.	118568819	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	0.834037348	knock down	up-regulate	0.020076715
REG00001	HK2-DT	HK2 divergent transcript	HGNC:55204	ENSG00000272711	.	118568819	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-0.84115012	knock out	down-regulator	0.000369859
REG00001	TTC23L-AS1	TTC23L antisense RNA 1	HGNC:55215	ENSG00000272323	.	101929704	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-2.053160856	knock out	down-regulator	0.000377296
REG00001	LINC02891	Long intergenic non-protein coding RNA 2891	HGNC:55221	ENSG00000249923	.	284865	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-1.075488032	knock out	down-regulator	1.17E-10
REG00001	BCAN-AS1	BCAN antisense RNA 1	HGNC:55233	ENSG00000272068	.	105371453	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-1.088006087	knock out	down-regulator	1.23E-09
REG00001	JARID2-DT	JARID2 divergent transcript	HGNC:55240	ENSG00000271888	.	118597839	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	0.954346893	knock down	up-regulate	0.002730007
REG00001	PRKACB-DT	PRKACB divergent transcript	HGNC:55245	ENSG00000271576	.	118597836	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-1.413102562	knock down	down-regulator	0.004716065
REG00001	MAP2K5-DT	MAP2K5 divergent transcript	HGNC:55261	ENSG00000270964	.	118732298	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	6.06948673	knock down	up-regulate	0.007303494
REG00001	USP34-DT	USP34 divergent transcript	HGNC:55262	ENSG00000270820	.	105377633	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-0.784026525	knock out	down-regulator	0.001082939
REG00001	NAV2-AS6	NAV2 antisense RNA 6	HGNC:55264	ENSG00000270607	.	100126784	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	1.008329431	knock down	up-regulate	2.80E-05
REG00001	ATP6V0D1-DT	ATP6V0D1 divergent transcript	HGNC:55268	ENSG00000270049	.	101927837	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-0.985368962	knock out	down-regulator	6.18E-20
REG00001	EVA1A-AS	EVA1A antisense RNA	HGNC:55283	ENSG00000231172	.	101927884	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-0.703023246	knock down	down-regulator	0.005209402
REG00001	BSG-AS1	BSG antisense RNA 1	HGNC:55286	ENSG00000267751	.	105372233	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-0.636834837	knock out	down-regulator	1.00E-05
REG00001	UQCRFS1-DT	UQCRFS1 divergent transcript	HGNC:55295	ENSG00000267498	.	105372352	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-2.478016063	knock down	down-regulator	0.005159655
REG00001	UQCRFS1-DT	UQCRFS1 divergent transcript	HGNC:55295	ENSG00000267498	.	105372352	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-0.618713207	knock out	down-regulator	0.048435008
REG00001	ATXN7L3-AS1	ATXN7L3 antisense RNA 1	HGNC:55298	ENSG00000267394	.	101926967	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	1.220705554	knock out	up-regulate	0.013434585
REG00001	MAP4K1-AS1	MAP4K1 antisense RNA 1	HGNC:55302	ENSG00000267291	.	105372397	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-1.238953486	knock out	down-regulator	5.58E-23
REG00001	FMNL1-DT	FMNL1 divergent transcript	HGNC:55311	ENSG00000267121	.	339192	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	0.688699011	knock out	up-regulate	2.88E-05
REG00001	ZNF516-AS1	ZNF516 antisense RNA 1	HGNC:55324	ENSG00000265778	.	101927989	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-2.337098393	knock down	down-regulator	0.002359418
REG00001	EFCAB13-DT	EFCAB13 divergent transcript	HGNC:55338	ENSG00000263293	.	102724508	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	0.603797337	knock down	up-regulate	0.002731455
REG00001	SCIRT	Stem cell inhibitory RNA transcript	HGNC:55341	ENSG00000237686	.	101929705	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-1.266056021	knock down	down-regulator	0.000828389
REG00001	SCIRT	Stem cell inhibitory RNA transcript	HGNC:55341	ENSG00000237686	.	101929705	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-1.233295243	knock out	down-regulator	0.000307966
REG00001	LOC440173	long intergenic non-protein coding RNA 2893	HGNC:55359	ENSG00000269994	.	440173	Long non-coding RNA	Long non-coding	HEK293	CVCL_0045	Homo sapiens	Normal	.	CLIP-seq	28977517	GSE79577	.	.	.	.
REG00001	POLG-DT	POLG divergent transcript	HGNC:55363	ENSG00000261441	.	119545629	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	1.25148211	knock out	up-regulate	0.000777169
REG00001	OTULIN-DT	OTULIN divergent transcript	HGNC:55368	ENSG00000261360	.	728178	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-0.598021597	knock out	down-regulator	0.003745459
REG00001	ST3GAL1-DT	ST3GAL1 divergent transcript	HGNC:55372	ENSG00000261220	.	119545630	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-0.622387935	knock out	down-regulator	0.023966897
REG00001	DNAJA2-DT	DNAJA2 divergent transcript	HGNC:55375	ENSG00000261173	.	119545626	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-0.760407461	knock out	down-regulator	0.014943434
REG00001	TSPAN5-DT	TSPAN5 divergent transcript	HGNC:55389	ENSG00000260641	.	105377342	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-1.696160366	knock out	down-regulator	0.000573101
REG00001	MSRA-DT	MSRA divergent transcript	HGNC:55400	ENSG00000260093	.	105379234	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	0.932898082	knock out	up-regulate	0.002213506
REG00001	FBN1-DT	FBN1 divergent transcript	HGNC:55413	ENSG00000259705	.	105370809	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	1.101878943	knock out	up-regulate	0.000140285
REG00001	ISL1-DT	ISL1 divergent transcript	HGNC:55414	ENSG00000259663	.	642366	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-1.136498061	knock out	down-regulator	0.001560179
REG00001	SLC28A2-AS1	SLC28A2 antisense RNA 1	HGNC:55417	ENSG00000259520	.	101928414	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	0.58820848	knock down	up-regulate	0.000359748
REG00001	KIF26A-DT	KIF26A divergent transcript	HGNC:55439	ENSG00000258748	.	105370708	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	0.665803412	knock out	up-regulate	2.04E-19
REG00001	BAZ1A-AS1	BAZ1A antisense RNA 1	HGNC:55440	ENSG00000258738	.	112268124	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	1.49308234	knock out	up-regulate	3.03E-05
REG00001	AJUBA-DT	AJUBA divergent transcript	HGNC:55449	ENSG00000258457	.	107984660	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	1.097061774	knock out	up-regulate	0.039372491
REG00001	MRPS35-DT	MRPS35 divergent transcript	HGNC:55490	ENSG00000256377	.	107984461	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-1.000547435	knock down	down-regulator	0.043045512
REG00001	TMEM123-DT	TMEM123 divergent transcript	HGNC:55502	ENSG00000255337	.	101928424	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	3.517529175	knock down	up-regulate	1.99E-05
REG00001	CHKA-DT	CHKA divergent transcript	HGNC:55504	ENSG00000255236	.	105369362	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-2.913195528	knock down	down-regulator	0.040688052
REG00001	EMSY-DT	EMSY divergent transcript	HGNC:55507	ENSG00000255135	.	120883616	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	0.664628029	knock down	up-regulate	0.01566107
REG00001	UQCRB-AS1	UQCRB antisense RNA 1	HGNC:55521	ENSG00000254224	.	101927039	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-0.817196484	knock out	down-regulator	0.006038381
REG00001	CLN8-AS1	CLN8 antisense RNA 1	HGNC:55523	ENSG00000253982	.	101927752	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-1.044503126	knock out	down-regulator	0.044325939
REG00001	ENTPD4-DT	ENTPD4 divergent transcript	HGNC:55536	ENSG00000253390	.	121009645	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	0.754485166	knock out	up-regulate	0.00527095
REG00001	YPEL3-DT	YPEL3 divergent transcript	HGNC:55547	ENSG00000250616	.	101928595	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	0.881468072	knock out	up-regulate	3.43E-10
REG00001	PKD2L2-DT	PKD2L2 divergent transcript	HGNC:55557	ENSG00000250159	.	101928005	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-1.077288933	knock down	down-regulator	0.013772955
REG00001	CBLL1-AS1	CBLL1 antisense RNA 1	HGNC:55571	ENSG00000241764	.	101927974	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-0.822923937	knock down	down-regulator	0.025901367
REG00001	GTF2I-AS1	GTF2I antisense RNA 1	HGNC:55572	ENSG00000232729	.	101926943	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	1.376987098	knock out	up-regulate	0.018817527
REG00001	PRDM8-AS1	PRDM8 antisense RNA 1	HGNC:55581	ENSG00000248719	.	105377303	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	0.8001	knock out	up-regulate	0.04208
REG00001	FAM174A-DT	FAM174A divergent transcript	HGNC:55584	ENSG00000247877	.	121232371	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	0.604967081	knock out	up-regulate	0.023752211
REG00001	KCTD13-DT	KCTD13 divergent transcript	HGNC:55585	ENSG00000247735	.	107984836	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-0.750724317	knock out	down-regulator	4.69E-14
REG00001	BRPF3-AS1	BRPF3 antisense RNA 1	HGNC:55591	ENSG00000246982	.	102723648	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-0.608832238	knock out	down-regulator	2.88E-05
REG00001	MCPH1-DT	MCPH1 divergent transcript	HGNC:55599	ENSG00000246089	.	100287015	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	0.683929575	knock out	up-regulate	2.32E-07
REG00001	MSANTD2-AS1	MSANTD2 antisense RNA 1	HGNC:55601	ENSG00000245498	.	100507283	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-0.656495211	knock out	down-regulator	0.017348653
REG00001	PELP1-DT	PELP1 divergent transcript	HGNC:55614	ENSG00000244184	.	101559451	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-1.50004249	knock down	down-regulator	7.85E-05
REG00001	TWF2-DT	TWF2 divergent transcript	HGNC:55619	ENSG00000243224	.	101929054	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	2.285899755	knock out	up-regulate	0.000354782
REG00001	EXO5-DT	EXO5 divergent transcript	HGNC:55647	ENSG00000238287	.	105378672	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-0.603210944	knock out	down-regulator	0.026329784
REG00001	FIBCD1-AS1	FIBCD1 antisense RNA 1	HGNC:55657	ENSG00000236658	.	105376297	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	0.673197668	knock down	up-regulate	0.007651292
REG00001	ZNF747-DT	ZNF747 divergent transcript	HGNC:55668	ENSG00000235560	.	107984875	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-1.567080864	knock out	down-regulator	0.015096035
REG00001	CDC20-DT	CDC20 divergent transcript	HGNC:55681	ENSG00000234694	.	105378687	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	4.163502041	knock down	up-regulate	0.002409233
REG00001	GBX2-AS1	GBX2 and ASB18 antisense RNA 1	HGNC:55714	ENSG00000233611	.	121853074	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-1.347995192	knock out	down-regulator	0.02370027
REG00001	ING2-DT	ING2 divergent transcript	HGNC:55723	ENSG00000232648	.	389247	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-0.665974633	knock out	down-regulator	0.009191083
REG00001	IDH3B-DT	IDH3B divergent transcript	HGNC:55798	ENSG00000228293	.	122152330	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	0.836954838	knock out	up-regulate	0.006787793
REG00001	ZNF691-DT	ZNF691 divergent transcript	HGNC:55800	ENSG00000228192	.	122152325	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-1.375234262	knock out	down-regulator	0.006635899
REG00001	MYO1B-AS1	MYO1B antisense RNA 1	HGNC:55807	ENSG00000227542	.	122152331	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	1.568688146	knock out	up-regulate	0.004855445
REG00001	PPP1CB-DT	PPP1CB divergent transcript	HGNC:55829	ENSG00000226833	.	112267877	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	0.7289	knock down	up-regulate	0.00351
REG00001	HEXIM2-AS1	HEXIM2 antisense RNA 1	HGNC:55857	ENSG00000224505	.	112268203	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	1.432529144	knock out	up-regulate	0.03763615
REG00001	CALCRL-AS1	CALCRL and TFPI antisense RNA 1	HGNC:55863	ENSG00000224063	.	105373786	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-0.879117543	knock out	down-regulator	0.000686477
REG00001	PDGFA-DT	PDGFA divergent transcript	HGNC:55865	ENSG00000223855	.	441307	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-0.69141453	knock out	down-regulator	0.004511634
REG00001	CLDN14-AS1	CLDN14 antisense RNA 1	HGNC:55953	ENSG00000233818	.	105369301	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-2.046245048	knock down	down-regulator	0.007716655
REG00001	LINC02955	Long intergenic non-protein coding RNA 2955	HGNC:55973	ENSG00000256995	.	107984516	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	0.964355457	knock out	up-regulate	2.06E-06
REG00001	LINC02957	Long intergenic non-protein coding RNA 2957	HGNC:55977	ENSG00000260454	.	105376144	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	0.660787644	knock down	up-regulate	0.010955856
REG00001	LIM2-AS1	LIM2 and SIGLEC10 antisense RNA 1	HGNC:56004	ENSG00000268889	.	105372446	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	3.343596485	knock out	up-regulate	0.000230651
REG00001	LINC02970	Long intergenic non-protein coding RNA 2970	HGNC:56010	ENSG00000273812	.	105372712	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	0.946130697	knock down	up-regulate	0.000646225
REG00001	LINC02974	Long intergenic non-protein coding RNA 2974	HGNC:56017	ENSG00000266288	.	123706546	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-1.1082481	knock out	down-regulator	2.30E-07
REG00001	LOC101929331	long intergenic non-protein coding RNA 2975	HGNC:56025	ENSG00000224307	.	101929331	Long non-coding RNA	Long non-coding	HEK293	CVCL_0045	Homo sapiens	Normal	.	CLIP-seq	28977517	GSE79577	.	.	.	.
REG00001	RAB17-DT	RAB17 divergent transcript	HGNC:56028	ENSG00000234949	.	105373958	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-0.874917196	knock down	down-regulator	0.019236308
REG00001	MTA1-DT	MTA1 divergent transcript	HGNC:56032	ENSG00000251602	.	100507437	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	0.587691139	knock out	up-regulate	0.006747221
REG00001	RUSF1-DT	RUSF1 divergent transcript	HGNC:56038	ENSG00000260625	.	123706528	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-1.091728609	knock out	down-regulator	0.021860695
REG00001	SLCO4A1-AS2	SLCO4A1 antisense RNA 2	HGNC:56052	ENSG00000277496	.	101928465	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-0.755790049	knock down	down-regulator	0.001229647
REG00001	LINC02981	Long intergenic non-protein coding RNA 2981	HGNC:56055	ENSG00000214870	.	441204	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	2.267137447	knock down	up-regulate	6.41E-11
REG00001	LINC02983	Long intergenic non-protein coding RNA 2983	HGNC:56060	ENSG00000234432	.	100129484	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-2.514920419	knock down	down-regulator	1.14E-24
REG00001	LINC02983	Long intergenic non-protein coding RNA 2983	HGNC:56060	ENSG00000234432	.	100129484	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	1.443641782	knock out	up-regulate	3.02E-23
REG00001	LINC02984	Long intergenic non-protein coding RNA 2984	HGNC:56063	ENSG00000237807	.	100507516	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-0.83170152	knock down	down-regulator	2.79E-08
REG00001	RPL30-AS1	RPL30 antisense RNA 1	HGNC:56064	ENSG00000245970	.	123706519	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	0.74161668	knock out	up-regulate	0.02967592
REG00001	KLC1-AS1	KLC1 antisense RNA 1	HGNC:56065	ENSG00000246451	.	123706534	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-0.716643711	knock down	down-regulator	0.008528419
REG00001	TENM2-AS1	TENM2 antisense RNA 2	HGNC:56066	ENSG00000253978	.	101927862	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	0.956780846	knock down	up-regulate	0.048893885
REG00001	ARNT2-DT	ARNT2 divergent transcript	HGNC:56077	ENSG00000259495	.	101929560	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	1.777739879	knock out	up-regulate	0.023743699
REG00001	EIF5-DT	EIF5 divergent transcript	HGNC:56080	ENSG00000259775	.	123706522	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	0.644980629	knock down	up-regulate	0.000160758
REG00001	MIR30DHG	MIR30D and MIR30B host gene	HGNC:56081	ENSG00000259820	.	102723694	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	-0.882767373	knock down	down-regulator	0.005463267
REG00001	TRMT61A-DT	TRMT61A divergent transcript	HGNC:56082	ENSG00000260285	.	123706535	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-3.76422033	knock out	down-regulator	3.55E-05
REG00001	CDH3-AS1	CDH3 antisense RNA 1	HGNC:56084	ENSG00000260577	.	123706523	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	3.28109832	knock down	up-regulate	0.006357124
REG00001	CTNS-AS1	CTNS antisense RNA 1	HGNC:56090	ENSG00000262903	.	105371492	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	0.914568877	knock down	up-regulate	0.001638889
REG00001	LINC03000	Long intergenic non-protein coding RNA 3000	HGNC:56116	ENSG00000241956	.	105377703	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-0.616132941	knock out	down-regulator	4.11E-10
REG00001	LINC03007	Long intergenic non-protein coding RNA 3007	HGNC:56132	ENSG00000223561	.	646588	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	0.638270517	knock down	up-regulate	1.40E-08
REG00001	LINC03015	Long intergenic non-protein coding RNA 3015	HGNC:56143	ENSG00000242474	.	102723672	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	1.140078619	knock out	up-regulate	1.01E-42
REG00001	LHX2-AS1	LHX2 antisense RNA 1	HGNC:56163	ENSG00000236668	.	100505588	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-1.572366214	knock out	down-regulator	0.031498649
REG00001	LIPT2-AS1	LIPT2 antisense RNA 1	HGNC:56172	ENSG00000254837	.	100287896	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	1.354764667	knock down	up-regulate	0.002333934
REG00001	CADM1-AS1	CADM1 antisense RNA 1	HGNC:56177	ENSG00000256315	.	105369507	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-1.673981069	knock out	down-regulator	0.000570423
REG00001	MIDEAS-AS1	MIDEAS antisense RNA 1	HGNC:56194	ENSG00000259065	.	100506476	Long non-coding RNA	Long non-coding	253Jcells	CVCL_7935	Homo sapiens	Bladder cancer	2C94: Bladder cancer	RNA-seq	33634966	GSE150239	0.642089603	knock down	up-regulate	0.009850428
REG00001	RFPL3S	RFPL3 antisense	HGNC:9981	ENSG00000205853	RFL3S_HUMAN	10737	Long non-coding RNA	Long non-coding	HEK293 cell line	CVCL_0045	Homo sapiens	Healthy	.	RNA-seq	28977517	GSE79577	-0.936813495	knock out	down-regulator	0.002100807